RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 BSNDQ8WZ55 320 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 CAVIN3Q969G5 261 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 SPACA7Q96KW9 195 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ARMC7Q9H6L4 198 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 R3HDM2Q9Y2K5 976 aaKnown RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 CRYL1Q9Y2S2 319 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 XRCC4Q13426 336 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 MTM1Q13496 603 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 HLA-DQA1Q5Y7H0 255 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 C11orf96Q7Z7L8 435 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 EMC1Q8N766 993 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 RMND5AQ9H871 391 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 TMEM161AQ9NX61 479 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 KPNA5O15131 536 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 TGFB1I1O43294 461 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 AKAP10O43572 662 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 PFKMP08237 780 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 MAPK9P45984 424 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 PIK3CGP48736 1102 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 NPY2RP49146 381 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 OTUD4Q01804 1114 aaKnown RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 CAPSQ13938 189 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 IRGCQ6NXR0 463 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 DENND1BQ6P3S1 775 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 KRT78Q8N1N4 520 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 GPR20Q99678 358 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 MMADHCQ9H3L0 296 aaPredicted RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 AASDHPPTQ9NRN7 309 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 EURLQ9NYK6 297 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ZNF862O60290 1169 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 TBC1D4O60343 1298 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 DNTTP04053 509 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 HSPA1AP0DMV8 641 aaKnown RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 HSPA1BP0DMV9 641 aaKnown RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ICAM3P32942 547 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 IL12RB1P42701 662 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ZNF662Q6ZS27 426 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 TFAP2DQ7Z6R9 452 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 CYGBQ8WWM9 190 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 KAT5Q92993 513 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ELMO3Q96BJ8 720 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 LRRC39Q96DD0 335 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 NSL1Q96IY1 281 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 ATP13A3Q9H7F0 1226 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 NRDE2Q9H7Z3 1164 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 SOX13Q9UN79 622 aa10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 MTO1Q9Y2Z2 717 aaKnown RBP10.92□□□□□ -0.66
AMBRA1-202ENST00000458649 GUCY1B2O75343 617 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 MARSP56192 900 aaKnown RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 PPP2R2DQ66LE6 453 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 OR8D1Q8WZ84 308 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 FAM153AQ9UHL3 310 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 Q9Y3F1 56 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 PCDHA3Q9Y5H8 950 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 ADGRA2Q96PE1 1338 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 ADRB2P07550 413 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 RFC2P35250 354 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 PRKCZQ05513 592 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 FOXD4Q12950 439 aaPredicted RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 TPGS1Q6ZTW0 290 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 FAM124BQ9H5Z6 455 aaPredicted RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 ZDHHC4Q9NPG8 344 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 STARD13Q9Y3M8 1113 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 SLIT2O94813 1529 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 ERI2A8K979 691 aaKnown RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 KLHL2O95198 593 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 EOMESO95936 686 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 EIF2S1P05198 315 aaKnown RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 MMP13P45452 471 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 NFIL3Q16649 462 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 PPP1R15BQ5SWA1 713 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 NPHS2Q9NP85 383 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 RGS18Q9NS28 235 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 GPATCH2LQ9NWQ4 482 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 ASTN2O75129 1339 aaPredicted RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 F8W810 466 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 SYN3O14994 580 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.662e-17■■■□□ 18.2
AMBRA1-202ENST00000458649 CRHR2Q13324 411 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 KHDRBS2Q5VWX1 349 aaKnown RBP10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 KLHL35Q6PF15 583 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 BBS7Q8IWZ6 715 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 GPR88Q9GZN0 384 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 TKTL2Q9H0I9 626 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 CARD8Q9Y2G2 431 aa10.91□□□□□ -0.66
AMBRA1-202ENST00000458649 A0A0U1RQJ8 604 aa10.9□□□□□ -0.66
AMBRA1-202ENST00000458649 PYGMP11217 842 aa10.9□□□□□ -0.66
AMBRA1-202ENST00000458649 TRIM25Q14258 630 aaKnown RBP10.9□□□□□ -0.66
AMBRA1-202ENST00000458649 OTOAQ7RTW8 1153 aa10.9□□□□□ -0.66
AMBRA1-202ENST00000458649 MTERF3Q96E29 417 aa10.9□□□□□ -0.66
AMBRA1-202ENST00000458649 NOL6Q9H6R4 1146 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms