RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TTC31Q49AM3 519 aaPredicted RBP16.57■□□□□ 0.24
CD28-203ENST00000458610 ACCSLQ4AC99 568 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 BOLA3Q53S33 107 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 MANEALQ5VSG8 457 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 ZNF776Q68DI1 518 aaPredicted RBP16.57■□□□□ 0.24
CD28-203ENST00000458610 DNAAF5Q86Y56 855 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 DCAF4L2Q8NA75 395 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 SPON2Q9BUD6 331 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 NUP85Q9BW27 656 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
CD28-203ENST00000458610 NHEJ1Q9H9Q4 299 aaPredicted RBP16.57■□□□□ 0.24
CD28-203ENST00000458610 TMEM248Q9NWD8 314 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 SLCO3A1Q9UIG8 710 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 FARP1Q9Y4F1 1045 aaPredicted RBP16.57■□□□□ 0.24
CD28-203ENST00000458610 FGF10O15520 208 aaPredicted RBP16.56■□□□□ 0.24
CD28-203ENST00000458610 CREB3O43889 395 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 EPN2O95208 641 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 C7P10643 843 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 EPHB2P29323 1055 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 CD6P30203 668 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 CLCN6P51797 869 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 COPAP53621 1224 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 GEMIN4P57678 1058 aaKnown RBP16.56■□□□□ 0.24
CD28-203ENST00000458610 GNA12Q03113 381 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 ASTE1Q2TB18 679 aaPredicted RBP16.56■□□□□ 0.24
CD28-203ENST00000458610 PMS2CLQ68D20 193 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 IL31Q6EBC2 164 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 DSG4Q86SJ6 1040 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 ERLEC1Q96DZ1 483 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 MYO19Q96H55 970 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 RPL10LQ96L21 214 aaKnown RBP16.56■□□□□ 0.24
CD28-203ENST00000458610 CCDC114Q96M63 670 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 MAGEH1Q9H213 219 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 CTTNBP2NLQ9P2B4 639 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 UVRAGQ9P2Y5 699 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 NCKAP1Q9Y2A7 1128 aa16.56■□□□□ 0.24
CD28-203ENST00000458610 PIEZO1Q92508 2521 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 TTC34A8MYJ7 566 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 FAM72CH0Y354 149 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 DAPK3O43293 454 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 ATP9BO43861 1147 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 SIN3BO75182 1162 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 MIPP30301 263 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 DHPSP49366 369 aaPredicted RBP16.55■□□□□ 0.24
CD28-203ENST00000458610 YBEYP58557 167 aaPredicted RBP16.55■□□□□ 0.24
CD28-203ENST00000458610 TPI1P60174 286 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 RPL6Q02878 288 aaKnown RBP16.55■□□□□ 0.24
CD28-203ENST00000458610 FAM72AQ5TYM5 149 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 FAM72DQ6L9T8 149 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 FAM72BQ86X60 149 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 GAS2L3Q86XJ1 694 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 ZNF366Q8N895 744 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 NIPA2Q8N8Q9 360 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 ATP11CQ8NB49 1132 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 OR52K2Q8NGK3 314 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 FOXJ1Q92949 421 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 RSPH9Q9H1X1 276 aaPredicted RBP16.55■□□□□ 0.24
CD28-203ENST00000458610 DHX35Q9H5Z1 703 aaKnown RBP16.55■□□□□ 0.24
CD28-203ENST00000458610 ATP13A1Q9HD20 1204 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 USP36Q9P275 1121 aaKnown RBP16.55■□□□□ 0.24
CD28-203ENST00000458610 PCSK1NQ9UHG2 260 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 NENFQ9UMX5 172 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 CYP8B1Q9UNU6 501 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 AP4E1Q9UPM8 1137 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 HS3ST2Q9Y278 367 aa16.55■□□□□ 0.24
CD28-203ENST00000458610 IGHV1OR15-9A0A0B4J2B8 117 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 A0A0D9SEW6 157 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 WASH4PA8MWX3 477 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 CBX4O00257 560 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 EEF2KO00418 725 aaKnown RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 RAMP2O60895 175 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 LRCH4O75427 683 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 IGLV3-19P01714 112 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 TMEM253P0C7T8 217 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 TPMTP51580 245 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 RPS14P62263 151 aaKnown RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 CREB5Q02930 508 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 ELAVL3Q14576 367 aaKnown RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 POLD3Q15054 466 aaPredicted RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 DLG2Q15700 870 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 CSRP2Q16527 193 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 C9orf64Q5T6V5 341 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 NLRP14Q86W24 1093 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 PYROXD2Q8N2H3 581 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 DCLK2Q8N568 766 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 SH2D3CQ8N5H7 860 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 RTL3Q8N8U3 475 aaKnown RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 OR8D1Q8WZ84 308 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 CHP1Q99653 195 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 SLC6A17Q9H1V8 727 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 ARRDC1-AS1Q9H2J1 176 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 VPS45Q9NRW7 570 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 ZNF212Q9UDV6 495 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 DNAI1Q9UI46 699 aa16.54■□□□□ 0.24
CD28-203ENST00000458610 VPS51Q9UID3 782 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms