RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 PIGWQ7Z7B1 504 aa16.72■□□□□ 0.27
CAPN13-203ENST00000458085 CIR1Q86X95 450 aaPredicted RBP16.72■□□□□ 0.27
CAPN13-203ENST00000458085 LZTR1Q8N653 840 aa16.72■□□□□ 0.27
CAPN13-203ENST00000458085 TCP10LQ8TDR4 215 aa16.72■□□□□ 0.27
CAPN13-203ENST00000458085 TRIM43Q96BQ3 446 aaPredicted RBP16.72■□□□□ 0.27
CAPN13-203ENST00000458085 MAGEB18Q96M61 343 aa16.72■□□□□ 0.27
CAPN13-203ENST00000458085 FCRL3Q96P31 734 aaPredicted RBP16.72■□□□□ 0.27
CAPN13-203ENST00000458085 RC3H2Q9HBD1 1191 aaKnown RBP16.72■□□□□ 0.27
CAPN13-203ENST00000458085 CASS4Q9NQ75 786 aa16.72■□□□□ 0.27
CAPN13-203ENST00000458085 BACE2Q9Y5Z0 518 aa16.72■□□□□ 0.27
CAPN13-203ENST00000458085 GOLGA6L7A0A1B0GV03 622 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 WASH4PA8MWX3 477 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 ALDH1A2O94788 518 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 MT-CYBP00156 380 aaPredicted RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 KCNQ1P51787 676 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 SLC18A1P54219 525 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 ZNF33AQ06730 810 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 CERCAMQ5T4B2 595 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 GKAP1Q5VSY0 366 aaPredicted RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 NUGGCQ68CJ6 796 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 C6orf89Q6UWU4 347 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 SRLQ86TD4 932 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 BTN2A3PQ96KV6 586 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 TTLL2Q9BWV7 592 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 OLA1Q9NTK5 396 aaKnown RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 MATN3O15232 486 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 PYGBP11216 843 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 PGAM1P18669 254 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 ADRA1DP25100 572 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 NUMBP49757 651 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 TTC39BQ5VTQ0 682 aaPredicted RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 NADSYN1Q6IA69 706 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 LVRNQ6Q4G3 990 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 ATP6V0D2Q8N8Y2 350 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 IL12RB2Q99665 862 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 SSU72Q9NP77 194 aaKnown RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 ZNF180Q9UJW8 692 aa16.71■□□□□ 0.27
CAPN13-203ENST00000458085 RRP15Q9Y3B9 282 aaKnown RBP16.71■□□□□ 0.27
CAPN13-203ENST00000458085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
CAPN13-203ENST00000458085 CACNG3O60359 315 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 ZNF189O75820 626 aaPredicted RBP16.7■□□□□ 0.26
CAPN13-203ENST00000458085 GJB5O95377 273 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 SOD2P04179 222 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 HLA-DQB2P05538 268 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 ACRP10323 421 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 TPH1P17752 444 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 IL9RQ01113 521 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 NIPAL4Q0D2K0 466 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 IFT88Q13099 833 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 CACNA2D3Q8IZS8 1091 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 DNAAF3Q8N9W5 541 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 HMCESQ96FZ2 354 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 UBE2OQ9C0C9 1292 aaKnown RBP16.7■□□□□ 0.26
CAPN13-203ENST00000458085 ZYG11BQ9C0D3 744 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 COMMD8Q9NX08 183 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 PSAT1Q9Y617 370 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 IGLV3-10A0A075B6K4 115 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 F7P08709 466 aaPredicted RBP16.7■□□□□ 0.26
CAPN13-203ENST00000458085 RHOQP17081 205 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 HMGA1P17096 107 aaKnown RBP16.7■□□□□ 0.26
CAPN13-203ENST00000458085 SLC18A2Q05940 514 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 CGB2Q6NT52 195 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 ZNF212Q9UDV6 495 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
CAPN13-203ENST00000458085 RPS6KL1Q9Y6S9 549 aa16.7■□□□□ 0.26
CAPN13-203ENST00000458085 J3KR12 359 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 ATP9BO43861 1147 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 RFPL1O75677 317 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 PEX11BO96011 259 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 SNRPAP09012 282 aaKnown RBP16.69■□□□□ 0.26
CAPN13-203ENST00000458085 GBP2P32456 591 aaPredicted RBP16.69■□□□□ 0.26
CAPN13-203ENST00000458085 GJA8P48165 433 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 MROH9Q5TGP6 573 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 CDHR3Q6ZTQ4 885 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 CYS1Q717R9 158 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 KLHDC8BQ8IXV7 354 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 UMODL1-AS1Q8N2C9 162 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 GLOD4Q9HC38 313 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 RBM22Q9NW64 420 aaKnown RBP eCLIP16.69■□□□□ 0.26
CAPN13-203ENST00000458085 TMEM248Q9NWD8 314 aa16.69■□□□□ 0.26
CAPN13-203ENST00000458085 PPARGC1AQ9UBK2 798 aaKnown RBP16.69■□□□□ 0.26
CAPN13-203ENST00000458085 AFF4Q9UHB7 1163 aaKnown RBP16.69■□□□□ 0.26
CAPN13-203ENST00000458085 ABHD14A-ACY1A0A1B0GW23 586 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 ERI2A8K979 691 aaKnown RBP16.68■□□□□ 0.26
CAPN13-203ENST00000458085 ABLIM3O94929 683 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 ERVK-10P10266 1014 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 TUFMP49411 452 aaKnown RBP16.68■□□□□ 0.26
CAPN13-203ENST00000458085 NEK3P51956 506 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 WDR5P61964 334 aaKnown RBP16.68■□□□□ 0.26
CAPN13-203ENST00000458085 DNAJC3Q13217 504 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 FAM47EQ6ZV65 393 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 ZNF461Q8TAF7 563 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 TTC17Q96AE7 1141 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 ZNF512Q96ME7 567 aaPredicted RBP16.68■□□□□ 0.26
CAPN13-203ENST00000458085 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
CAPN13-203ENST00000458085 CYP4F11Q9HBI6 524 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms