RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	RTN2	O75298	545 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	AFM	P43652	599 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	RPS24	P62847	133 aa	Known RBP	13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	KCNMA1	Q12791	1236 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	GOLGA7B	Q2TAP0	167 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	SGO2	Q562F6	1265 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	FSCB	Q5H9T9	825 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	C3orf38	Q5JPI3	329 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	COLEC12	Q5KU26	742 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	XKR5	Q6UX68	686 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	MMS22L	Q6ZRQ5	1243 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	MAPK15	Q8TD08	544 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	GPT2	Q8TD30	523 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	PTPRN2	Q92932	1015 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	TATDN2	Q93075	761 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	APOLD1	Q96LR9	279 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	TIGD1	Q96MW7	591 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	SPAG5	Q96R06	1193 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	TRIM4	Q9C037	500 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	CNGB3	Q9NQW8	809 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	NLGN3	Q9NZ94	848 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	SATB2	Q9UPW6	733 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	PCDHGA8	Q9Y5G5	932 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	TERT	O14746	1132 aa	Known RBP	13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	PIAS2	O75928	621 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	TRIM49	P0CI25	452 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	TRIM49C	P0CI26	452 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	THEGL	P0DJG4	465 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	GIMD1	P0DJR0	217 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	NNMT	P40261	264 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	ENPEP	Q07075	957 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	PPP3CA	Q08209	521 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	BST2	Q10589	180 aa	Known RBP	13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	STK4	Q13043	487 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	CUL4B	Q13620	913 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	ARL13B	Q3SXY8	428 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	FAM46C	Q5VWP2	391 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	NADSYN1	Q6IA69	706 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	INTS8	Q75QN2	995 aa	Known RBP	13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	DSG4	Q86SJ6	1040 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	SCML4	Q8N228	414 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	EXD3	Q8N9H8	876 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	TMEM145	Q8NBT3	493 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	KIAA0895	Q8NCT3	520 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	PAGE5	Q96GU1	130 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	RPL10L	Q96L21	214 aa	Known RBP	13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	OSBPL2	Q9H1P3	480 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	HESX1	Q9UBX0	185 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	CA5B	Q9Y2D0	317 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	RELN	P78509	3460 aa		13.59	□□□□□ -0.23
SNHG17-208	ENST00000456953	LY6G6E	A0A0G2JKS1	128 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953		A0A1W2PNU3	283 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	NEMP2	A6NFY4	417 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	CDRT15L2	A8MXV6	281 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	LUC7L3	O95232	432 aa	Known RBP	13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	MLLT3	P42568	568 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	METAP1	P53582	386 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	TBX4	P57082	545 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	DAOA	P59103	153 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	CLN3	Q13286	438 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	C6orf132	Q5T0Z8	1188 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	AGBL4	Q5VU57	503 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	ATG14	Q6ZNE5	492 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	GRAMD1C	Q8IYS0	662 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	IFI44	Q8TCB0	444 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	KCTD13	Q8WZ19	329 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	MYEOV	Q96EZ4	313 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	IFT43	Q96FT9	208 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	ATXN7L3B	Q96GX2	97 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	DUSP23	Q9BVJ7	150 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	TMEM8A	Q9HCN3	771 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	PREB	Q9HCU5	417 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	STARD5	Q9NSY2	213 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	EXOC1	Q9NV70	894 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	NCKIPSD	Q9NZQ3	722 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	TSPAN16	Q9UKR8	245 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953		U3KQA8	63 aa		13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	SPTAN1	Q13813	2472 aa	Known RBP	13.58	□□□□□ -0.24
SNHG17-208	ENST00000456953	USP9Y	O00507	2555 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	RIOK3	O14730	519 aa	Known RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	SCAMP1	O15126	338 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	CALU	O43852	315 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	SETSIP	P0DME0	302 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	MYF5	P13349	255 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	KRT13	P13646	458 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	VAV1	P15498	845 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	GTF2H1	P32780	548 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	STK19	P49842	368 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	CNTN1	Q12860	1018 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	POM121L1P	Q3SYA9	428 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	MS4A13	Q5J8X5	152 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	CLEC14A	Q86T13	490 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	APCDD1	Q8J025	514 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	CFAP52	Q8N1V2	620 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	ARL14	Q8N4G2	192 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	FRS2	Q8WU20	508 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	OR8D1	Q8WZ84	308 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	IRGQ	Q8WZA9	623 aa		13.57	□□□□□ -0.24

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