RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 C11orf70Q9BRQ4 267 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 MUC3BQ9H195 1237 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 HSD3B7Q9H2F3 369 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 C6orf106Q9H6K1 298 aaPredicted RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 FSCN3Q9NQT6 498 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 NYNRINQ9P2P1 1898 aaKnown RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 EIF2B4Q9UI10 523 aaKnown RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 ANGPTL2Q9UKU9 493 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 OR51B4Q9Y5P0 310 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 LRRC72A6NJI9 287 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 MID1O15344 667 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 CER1O95813 267 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 CD27P26842 260 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 PTPN9P43378 593 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 STK19P49842 368 aaPredicted RBP18.35■□□□□ 0.53
MSH6-207ENST00000456246 IRAK1P51617 712 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 ZNF252P-AS1Q0IIN9 211 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 ANO6Q4KMQ2 910 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 FILIP1LQ4L180 1135 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 FAM46CQ5VWP2 391 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 TRNP1Q6NT89 227 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 PPP1R2P3Q6NXS1 205 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 ZNF783Q6ZMS7 281 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 STRADAQ7RTN6 431 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 PIP4P1Q86T03 277 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 PHF13Q86YI8 300 aaPredicted RBP18.35■□□□□ 0.53
MSH6-207ENST00000456246 STK40Q8N2I9 435 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 DCAF4L2Q8NA75 395 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 C1orf216Q8TAB5 229 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 FRS2Q8WU20 508 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 OR8D1Q8WZ84 308 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 CCDC114Q96M63 670 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 FAM129BQ96TA1 746 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 OMDQ99983 421 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 RETREG1Q9H6L5 497 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 ADAM22Q9P0K1 906 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 MYO6Q9UM54 1294 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 HS3ST2Q9Y278 367 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 ADAMTS9Q9P2N4 1935 aa18.35■□□□□ 0.53
MSH6-207ENST00000456246 A0A1W2PP55 124 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 E9PAM4 449 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 I6L893 689 aaPredicted RBP18.34■□□□□ 0.53
MSH6-207ENST00000456246 RNASEH2AO75792 299 aaKnown RBP18.34■□□□□ 0.53
MSH6-207ENST00000456246 IL1BP01584 269 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 FERP16591 822 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 GOT1P17174 413 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 GRIA4P48058 902 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 PSMD8P48556 350 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 CLCN6P51797 869 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 CLEC16AQ2KHT3 1053 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 KIAA0895LQ68EN5 471 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 FAM131BQ86XD5 332 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 C3orf20Q8ND61 904 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 DEFB124Q8NES8 71 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 OR2T34Q8NGX1 318 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 SLC30A5Q8TAD4 765 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 BIRC7Q96CA5 298 aa18.34■□□□□ 0.53
MSH6-207ENST00000456246 PPARGC1AQ9UBK2 798 aaKnown RBP18.34■□□□□ 0.53
MSH6-207ENST00000456246 PCNX2A6NKB5 2137 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 C2CD4BA6NLJ0 364 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 C1QTNF3-AMACRE9PGA6 284 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 SLC7A4O43246 635 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 GJB3O75712 270 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 CNTN5O94779 1100 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 FSBPO95073 299 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 ZNF883P0CG24 379 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 KRT3P12035 628 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 ATP1A3P13637 1013 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 OR1E1P30953 314 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 ATP11AP98196 1134 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 NRG1Q02297 640 aaPredicted RBP18.33■□□□□ 0.52
MSH6-207ENST00000456246 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.52
MSH6-207ENST00000456246 DLG2Q15700 870 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 ACCSLQ4AC99 568 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 ALFQ53S48 1182 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 CAVIN1Q6NZI2 390 aaKnown RBP18.33■□□□□ 0.52
MSH6-207ENST00000456246 EMC1Q8N766 993 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 OR52K2Q8NGK3 314 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 RXFP2Q8WXD0 754 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 ZYG11BQ9C0D3 744 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 NEUROG2Q9H2A3 272 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 KDM4CQ9H3R0 1056 aa18.33■□□□□ 0.52
MSH6-207ENST00000456246 SEPT11Q9NVA2 429 aaKnown RBP18.33■□□□□ 0.52
MSH6-207ENST00000456246 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
MSH6-207ENST00000456246 DOCK4Q8N1I0 1966 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 ILVBLA1L0T0 632 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 GIPC1O14908 333 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 DESP17661 470 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 ETFBP38117 255 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 ZNF165P49910 485 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 CCR5P51681 352 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 GALCP54803 685 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 PTP4A2Q12974 167 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 TFAP2DQ7Z6R9 452 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 PCDHB18PQ96TA0 734 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 AGPAT1Q99943 283 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms