RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 LRRC40Q9H9A6 602 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 CLIC5Q9NZA1 410 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 UBP1Q9NZI7 540 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 VANGL2Q9ULK5 521 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 RPS6KL1Q9Y6S9 549 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 PLXNA3P51805 1871 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 MATN3O15232 486 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 PSMD3O43242 534 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 FSBPO95073 299 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 CCL5P13501 91 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 CCNFP41002 786 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 NPY2RP49146 381 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 PAPOLAP51003 745 aaKnown RBP9.04□□□□□ -0.96
RPE-216ENST00000454822 MGAT5Q09328 741 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 SMARCB1Q12824 385 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 CERCAMQ5T4B2 595 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 PRSS55Q6UWB4 352 aaPredicted RBP9.04□□□□□ -0.96
RPE-216ENST00000454822 PACS1Q6VY07 963 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 SLC39A5Q6ZMH5 540 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 TIFABQ6ZNK6 161 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 ANKS3Q6ZW76 656 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 ZNF683Q8IZ20 524 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 CDKL2Q92772 493 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 SRPK1Q96SB4 655 aaKnown RBP9.04□□□□□ -0.96
RPE-216ENST00000454822 IL12RB2Q99665 862 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 APOL2Q9BQE5 337 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 PLCD4Q9BRC7 762 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 PPP1R12CQ9BZL4 782 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 ACTR5Q9H9F9 607 aaPredicted RBP9.04□□□□□ -0.96
RPE-216ENST00000454822 ALG13Q9NP73 1137 aaKnown RBP9.04□□□□□ -0.96
RPE-216ENST00000454822 TLR8Q9NR97 1041 aaKnown RBP9.04□□□□□ -0.96
RPE-216ENST00000454822 ABCF3Q9NUQ8 709 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
RPE-216ENST00000454822 COMMD8Q9NX08 183 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 SLC17A6Q9P2U8 582 aa9.04□□□□□ -0.96
RPE-216ENST00000454822 MAGEB16A2A368 324 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 UPP2O95045 317 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 ERVK-10P10266 1014 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 TPH1P17752 444 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 CNTFP26441 200 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 PSEN1P49768 467 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 NAB1Q13506 487 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
RPE-216ENST00000454822 MS4A13Q5J8X5 152 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 C10orf120Q5SQS8 335 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
RPE-216ENST00000454822 ANKRD33Q7Z3H0 272 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 TMEM135Q86UB9 458 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 MIB1Q86YT6 1006 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 KLHDC8BQ8IXV7 354 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 LRRC43Q8N309 656 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.03□□□□□ -0.96
RPE-216ENST00000454822 ATP6V0D2Q8N8Y2 350 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 CCDC63Q8NA47 563 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 C2orf15Q8WU43 125 aaKnown RBP9.03□□□□□ -0.96
RPE-216ENST00000454822 PPM1EQ8WY54 764 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 FCRL5Q96RD9 977 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
RPE-216ENST00000454822 SLC13A1Q9BZW2 595 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 NOL6Q9H6R4 1146 aaKnown RBP9.03□□□□□ -0.96
RPE-216ENST00000454822 MANSC1Q9H8J5 431 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 GLOD4Q9HC38 313 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 OLA1Q9NTK5 396 aaKnown RBP9.03□□□□□ -0.96
RPE-216ENST00000454822 IL1RAPL1Q9NZN1 696 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 MARCH2Q9P0N8 246 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 KLHL14Q9P2G3 628 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 GGT7Q9UJ14 662 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 PLLPQ9Y342 182 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 CDY1Q9Y6F8 540 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
RPE-216ENST00000454822 FNDC1Q4ZHG4 1894 aaPredicted RBP9.02□□□□□ -0.96
RPE-216ENST00000454822 SLC12A8A0AV02 714 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 ADAM12O43184 909 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 ATP9BO43861 1147 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 USP1O94782 785 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 PARNO95453 639 aaKnown RBP9.02□□□□□ -0.96
RPE-216ENST00000454822 RHOQP17081 205 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 SCTRP47872 440 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.96
RPE-216ENST00000454822 TLE2Q04725 743 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 SMAD1Q15797 465 aaKnown RBP9.02□□□□□ -0.96
RPE-216ENST00000454822 PSMD5Q16401 504 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 ANKRD20A4Q4UJ75 823 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 RNF43Q68DV7 783 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 NAPEPLDQ6IQ20 393 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 TIGD7Q6NT04 549 aaPredicted RBP9.02□□□□□ -0.96
RPE-216ENST00000454822 ZNF449Q6P9G9 518 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 OTOAQ7RTW8 1153 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 RASSF3Q86WH2 238 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 CHSY1Q86X52 802 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 LRRC49Q8IUZ0 686 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 NDUFAF2Q8N183 169 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 FBXO22Q8NEZ5 403 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 SPATA22Q8NHS9 363 aa9.02□□□□□ -0.96
RPE-216ENST00000454822 PTPRN2Q92932 1015 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms