RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ARHGAP17Q68EM7 881 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 ZNF470Q6ECI4 717 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 LRRC74BQ6ZQY2 392 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 ACAD11Q709F0 780 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 KCNMB4Q86W47 210 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 TDRD5Q8NAT2 981 aaKnown RBP11.4□□□□□ -0.58
DDR1-240ENST00000454612 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDR1-240ENST00000454612 OLFM3Q96PB7 478 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 TUBB6Q9BUF5 446 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 CCDC167Q9P0B6 97 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
DDR1-240ENST00000454612 ANKRD33BA6NCL7 494 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 GFAPP14136 432 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.59
DDR1-240ENST00000454612 FUT11Q495W5 492 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 TRNP1Q6NT89 227 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 PQLC3Q8N755 202 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 CMASQ8NFW8 434 aaPredicted RBP11.4□□□□□ -0.59
DDR1-240ENST00000454612 CDRT15Q96T59 188 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 NMRK1Q9NWW6 199 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 LGALS13Q9UHV8 139 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 PLLPQ9Y342 182 aa11.4□□□□□ -0.59
DDR1-240ENST00000454612 DNAH12Q6ZR08 3092 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 A0A0A0MRY4 1105 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 C17orf102A2RUQ5 167 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 FAM72CH0Y354 149 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 CXCL11O14625 94 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 PSMG1O95456 288 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ICAM3P32942 547 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 CLCNKBP51801 687 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 BLMHQ13867 455 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 STILQ15468 1287 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 DDR2Q16832 855 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 FAM72AQ5TYM5 149 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 FAM72DQ6L9T8 149 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 FAM72BQ86X60 149 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ANKRD52Q8NB46 1076 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 SPATA13Q96N96 652 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ARHGEF38Q9NXL2 777 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 TAGLN3Q9UI15 199 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 SLC27A5Q9Y2P5 690 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ERI2A8K979 691 aaKnown RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 PGM3O95394 542 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 MPSTP25325 297 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 PBX3P40426 434 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ARHGAP1Q07960 439 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 DMPKQ09013 629 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 TBL3Q12788 808 aaKnown RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 CYLC2Q14093 348 aaPredicted RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 TCEAL1Q15170 157 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 PACS1Q6VY07 963 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 DENND6AQ8IWF6 608 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ZNF567Q8N184 647 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 TRIML2Q8N7C3 387 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 PIWIL2Q8TC59 973 aaKnown RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 SPATA17Q96L03 361 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 LHX5Q9H2C1 402 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ARHGEF4Q9NR80 690 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ARHGEF3Q9NR81 526 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 PCDHGC3Q9UN70 934 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 MAGEA13PA6NCF6 341 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 NRP1O14786 923 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ITGB6P18564 788 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 GCAP28676 217 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 SLC26A2P50443 739 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 SERPINB9P50453 376 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 PHEXP78562 749 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 SGO1Q5FBB7 561 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 TREML1Q86YW5 311 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 DRAXINQ8NBI3 349 aaPredicted RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 IFT43Q96FT9 208 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 ZNF778Q96MU6 729 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 RPRD1AQ96P16 312 aaPredicted RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 NR1H4Q96RI1 486 aaPredicted RBP11.39□□□□□ -0.59
DDR1-240ENST00000454612 PAAF1Q9BRP4 392 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 LRRC40Q9H9A6 602 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 SSX2IPQ9Y2D8 614 aa11.39□□□□□ -0.59
DDR1-240ENST00000454612 CHADO15335 359 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 GLRA3O75311 464 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 SPAG6O75602 509 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 FESP07332 822 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 CHRNGP07510 517 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 NRF1Q16656 503 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDR1-240ENST00000454612 MCRS1Q96EZ8 462 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 CERS2Q96G23 380 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 VPS39Q96JC1 886 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 ABHD16BQ9H3Z7 469 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 SNX15Q9NRS6 342 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 IPPQ9Y573 584 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 TBX10O75333 385 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 LTFP02788 710 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 NPR3P17342 541 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 TKTP29401 623 aaKnown RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 CD52P31358 61 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms