RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 BCCIPQ9P287 314 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 VPS51Q9UID3 782 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 MBD1Q9UIS9 605 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 ANAPC7Q9UJX3 599 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 VPS28Q9UK41 221 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 IGHV1OR15-9A0A0B4J2B8 117 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 A0A0D9SEW6 157 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 TARSL2A2RTX5 802 aaKnown RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 DCLK1O15075 740 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 AKR1B10O60218 316 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 SYNCRIPO60506 623 aaKnown RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 ZMPSTE24O75844 475 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 RNF8O76064 485 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 MTA2O94776 668 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 EPN2O95208 641 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 LCA5LO95447 670 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 H2AFZP0C0S5 128 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 TCF4P15884 667 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 IL1R2P27930 398 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 OR1E1P30953 314 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 ZNF135P52742 658 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 ST8SIA6P61647 398 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 GNA12Q03113 381 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 CA9Q16790 459 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 H2AFVQ71UI9 128 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 ALYREFQ86V81 257 aaKnown RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 SH2D3CQ8N5H7 860 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 FAM160A2Q8N612 972 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 RTL3Q8N8U3 475 aaKnown RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 OR7D4Q8NG98 312 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 CTNNBL1Q8WYA6 563 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 LOXL4Q96JB6 756 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 SPACA7Q96KW9 195 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 CCDC42Q96M95 316 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 PANX2Q96RD6 677 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 KCTD15Q96SI1 283 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 C2orf49Q9BVC5 232 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 ACE2Q9BYF1 805 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-205ENST00000454542 MUC3BQ9H195 1237 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 GPATCH2LQ9NWQ4 482 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 SUN2Q9UH99 717 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 IP6K2Q9UHH9 426 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 SLCO3A1Q9UIG8 710 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 USP18Q9UMW8 372 aa14.53□□□□□ -0.08
HDAC4-205ENST00000454542 GVINP1Q7Z2Y8 2422 aa14.52□□□□□ -0.08
HDAC4-205ENST00000454542 FRYLO94915 3013 aa14.52□□□□□ -0.08
HDAC4-205ENST00000454542 EDDM13A0A1B0GTR0 161 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 TTC34A8MYJ7 566 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 FGF10O15520 208 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 PRPSAP2O60256 369 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 SNAP91O60641 907 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 SIN3BO75182 1162 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 ZNF217O75362 1048 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 RETP07949 1114 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 ARF5P84085 180 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 BYSLQ13895 437 aaKnown RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 TCEAL1Q15170 157 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 DPYSL2Q16555 572 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 ERMARDQ5T6L9 678 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 C9orf64Q5T6V5 341 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 DAB2IPQ5VWQ8 1189 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 RWDD4Q6NW29 188 aaKnown RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 PRR23BQ6ZRT6 265 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 CEP68Q76N32 757 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 TMPRSS6Q8IU80 811 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 TEKT4Q8WW24 435 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 RUBCNQ92622 972 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 PTPRN2Q92932 1015 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 RPL10LQ96L21 214 aaKnown RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 RSPH9Q9H1X1 276 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 MTG2Q9H4K7 406 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 NOL6Q9H6R4 1146 aaKnown RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 PRDM16Q9HAZ2 1276 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 LCMT1Q9UIC8 334 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 SLC25A13Q9UJS0 675 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 INTUQ9ULD6 942 aa14.52□□□□□ -0.09
HDAC4-205ENST00000454542 ZFHX2Q9C0A1 2572 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-205ENST00000454542 FAM186AA6NE01 2351 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 LRP3O75074 770 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 PROSCO94903 275 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 SRCP12931 536 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 TGM1P22735 817 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 GLDCP23378 1020 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 EPHB2P29323 1055 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 MAN1A1P33908 653 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 ETFBP38117 255 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 CLCN6P51797 869 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 TPI1P60174 286 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 RPS14P62263 151 aaKnown RBP14.51□□□□□ -0.09
HDAC4-205ENST00000454542 KRT83P78385 493 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 ZBTB16Q05516 673 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 SPDYCQ5MJ68 293 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 KIAA1324Q6UXG2 1013 aaKnown RBP14.51□□□□□ -0.09
HDAC4-205ENST00000454542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-205ENST00000454542 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 FRMD1Q8N878 549 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 FAM71BQ8TC56 605 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 RLN3Q8WXF3 142 aa14.51□□□□□ -0.09
HDAC4-205ENST00000454542 RFFLQ8WZ73 363 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms