RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 LINGO4Q6UY18 593 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PTAR1Q7Z6K3 402 aaPredicted RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CCAR2Q8N163 923 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC22A18ASQ8N1D0 253 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ENGASEQ8NFI3 743 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OR13H1Q8NG92 308 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FIBINQ8TAL6 211 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FRS2Q8WU20 508 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC35F5Q8WV83 523 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KCTD13Q8WZ19 329 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PTPRN2Q92932 1015 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CCDC47Q96A33 483 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TTC17Q96AE7 1141 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KREMEN1Q96MU8 473 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SERPINB11Q96P15 392 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NT5C1BQ96P26 610 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CALN1Q9BXU9 219 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TRIM4Q9C037 500 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OSBPL2Q9H1P3 480 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TMPRSS4Q9NRS4 437 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ADAMTS1Q9UHI8 967 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CFAP45Q9UL16 551 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FZD4Q9ULV1 537 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CTNND2Q9UQB3 1225 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CLCA2Q9UQC9 943 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ITIH6Q6UXX5 1313 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TRPM6Q9BX84 2022 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SPENQ96T58 3664 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RELNP78509 3460 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LY6G6EA0A0G2JKS1 128 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 A0A1W2PQU0 124 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 F5H5T6 163 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KPNA3O00505 521 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CAPN9O14815 690 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PLRG1O43660 514 aaKnown RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF202O95125 648 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TRUB2O95900 331 aaKnown RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MT-CO1P00395 513 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 APOEP02649 317 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MYL1P05976 194 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GIMD1P0DJR0 217 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CD44P16070 742 aaKnown RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CKMT2P17540 419 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TFE3P19532 575 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C5AR1P21730 350 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RRM1P23921 792 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CCR5P51681 352 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C19orf57Q0VDD7 668 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PDCLQ13371 301 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ACCSLQ4AC99 568 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CCDC40Q4G0X9 1142 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TAF1BQ53T94 588 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LRRC73Q5JTD7 316 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TPRG1LQ5T0D9 272 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MPP7Q5T2T1 576 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PIP5KL1Q5T9C9 394 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OTUD1Q5VV17 481 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KIAA1614Q5VZ46 1190 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FOXR1Q6PIV2 292 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LRRC69Q6ZNQ3 347 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SND1Q7KZF4 910 aaKnown RBP eCLIP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TFAP2DQ7Z6R9 452 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C14orf80Q86SX3 495 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 UNC45BQ8IWX7 931 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC25A45Q8N413 288 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DCBLD1Q8N8Z6 715 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CHST14Q8NCH0 376 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 BAP1Q92560 729 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SNX21Q969T3 373 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VOPP1Q96AW1 172 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARRDC3Q96B67 414 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC39A13Q96H72 371 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RPRD1AQ96P16 312 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TSG101Q99816 390 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 UBXN6Q9BZV1 441 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DNAI2Q9GZS0 605 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TNKS2Q9H2K2 1166 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SYNDIG1Q9H7V2 258 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PLCB1Q9NQ66 1216 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ANLNQ9NQW6 1124 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DDIT4Q9NX09 232 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARHGAP20Q9P2F6 1191 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARMCX3Q9UH62 379 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SUN2Q9UH99 717 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 USP25Q9UHP3 1055 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GGT7Q9UJ14 662 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VPS28Q9UK41 221 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 AJAP1Q9UKB5 411 aaPredicted RBP6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VANGL2Q9ULK5 521 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ITM2BQ9Y287 266 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TLR6Q9Y2C9 796 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 COQ4Q9Y3A0 265 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PCDHGA1Q9Y5H4 931 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 U3KQA8 63 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FLNCQ14315 2725 aa6.17□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SPTAN1Q13813 2472 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms