RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 FAM160B1Q5W0V3 765 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 DARS2Q6PI48 645 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 NUDCD3Q8IVD9 361 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 CDKL2Q92772 493 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 E2F7Q96AV8 911 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 C7orf26Q96N11 449 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 SLC39A3Q9BRY0 314 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 PI4K2AQ9BTU6 479 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 INO80BQ9C086 356 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 TLL2Q9Y6L7 1015 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZNF701M0R085 212 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 TNNC2P02585 160 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 NR4A1P22736 598 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZBED5Q49AG3 693 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 SETD3Q86TU7 594 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 TICAM1Q8IUC6 712 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 LILRB4Q8NHJ6 448 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 RMND5BQ96G75 393 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 MCEEQ96PE7 176 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 MROH8Q9H579 483 aa13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 APOBEC3GQ9HC16 384 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-204ENST00000449372 H3BNH8 94 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CLASP2O75122 1294 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 KRT10P13645 584 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 PROZP22891 400 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 SSTR1P30872 391 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 ACOT2P49753 483 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZPBP2Q6X784 338 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 RFPL4BQ6ZWI9 263 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 UBR7Q8N806 425 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 ATP11BQ9Y2G3 1177 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 GMNNO75496 209 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 BANF1O75531 89 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 MYL4P12829 197 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CD247P20963 164 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 MRPS22P82650 360 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 FGD3Q5JSP0 725 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CYP2U1Q7Z449 544 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 FNIP1Q8TF40 1166 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 MZB1Q8WU39 189 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 TRUB1Q8WWH5 349 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 MMP19Q99542 508 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 MECRQ9BV79 373 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 ARHGEF37A1IGU5 675 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CST8O60676 142 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 GPX6P59796 221 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 TSPY1Q01534 308 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 LRRC49Q8IUZ0 686 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 SPERTQ8NA61 448 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 SUN5Q8TC36 379 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CAPSLQ8WWF8 208 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 KATNBL1Q9H079 304 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CNTN3Q9P232 1028 aa13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 APOBEC2Q9Y235 224 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-204ENST00000449372 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SDR42E2A6NKP2 422 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 GOLGA8SH3BPF8 625 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 GOLGA8MH3BSY2 632 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 H7C0C1 242 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 TOMM70O94826 608 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 KRT3P12035 628 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ATP5OP48047 213 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 OTUD4Q01804 1114 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 GNA12Q03113 381 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 FSCBQ5H9T9 825 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 CHERPQ8IWX8 916 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SLC35B2Q8TB61 432 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 HERC2P3Q9BVR0 1158 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 NIF3L1Q9GZT8 377 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 LOC100653049A0A140TA62 436 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 PSMD11O00231 422 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 KMOO15229 486 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 KRT34O76011 436 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 MYO1DO94832 1006 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 BMP10O95393 424 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 CD19P15391 556 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 OSBPP22059 807 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 HNRNPFP52597 415 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 GRM1Q13255 1194 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 NRF1Q16656 503 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 IER5Q5VY09 327 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 FRA10AC1Q70Z53 315 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ARCQ7LC44 396 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ACTL9Q8TC94 416 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 TMEM121Q9BTD3 319 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 RPF2Q9H7B2 306 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms