RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PARP15Q460N3 678 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 SLC45A4Q5BKX6 768 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 FAM182AQ5T1J6 154 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 MPP7Q5T2T1 576 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 RNF219Q5W0B1 726 aaPredicted RBP14.99□□□□□ -0.01
TNF-208ENST00000449264 AFMIDQ63HM1 303 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 DRICH1Q6PGQ1 229 aaPredicted RBP14.99□□□□□ -0.01
TNF-208ENST00000449264 SETD3Q86TU7 594 aaPredicted RBP14.99□□□□□ -0.01
TNF-208ENST00000449264 NAT16Q8N8M0 369 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 OR7D4Q8NG98 312 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 TTC8Q8TAM2 541 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 FAM83CQ9BQN1 747 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 RETREG1Q9H6L5 497 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 SEPT10Q9P0V9 454 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 TBC1D30Q9Y2I9 924 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 NCAM2O15394 837 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 KCNN4O15554 427 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 TTI1O43156 1089 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 RAD51CO43502 376 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 ECEL1O95672 775 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 IFNB1P01574 187 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 ITGAVP06756 1048 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 IL9P15248 144 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 VAV1P15498 845 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 RBL1P28749 1068 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 CSKP41240 450 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 GDF10P55107 478 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 HEATR6Q6AI08 1181 aaKnown RBP14.98□□□□□ -0.01
TNF-208ENST00000449264 IL31Q6EBC2 164 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 MMGT1Q8N4V1 131 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 ATL2Q8NHH9 583 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 GRK7Q8WTQ7 553 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 HDAC11Q96DB2 347 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 SPON2Q9BUD6 331 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 TRMT61BQ9BVS5 477 aaKnown RBP14.98□□□□□ -0.01
TNF-208ENST00000449264 SP110Q9HB58 689 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 HPS4Q9NQG7 708 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 MARK1Q9P0L2 795 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 PCYOX1Q9UHG3 505 aa14.98□□□□□ -0.01
TNF-208ENST00000449264 MYO18AQ92614 2054 aaKnown RBP14.98□□□□□ -0.01
TNF-208ENST00000449264 ILVBLA1L0T0 632 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 OTOL1A6NHN0 477 aaPredicted RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 EFCAB8A8MWE9 144 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 HACD1B0YJ81 288 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 ANHXE9PGG2 379 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 RHOXF2BP0C7M4 288 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 MZF1P28698 734 aaPredicted RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 NRLP54845 237 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 YBEYP58557 167 aaPredicted RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 GAD2Q05329 585 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 PPIDQ08752 370 aaKnown RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 LMAN2Q12907 356 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 PRKD1Q15139 912 aaPredicted RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 PPP1R7Q15435 360 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 TRIP13Q15645 432 aaPredicted RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 PRUNE1Q86TP1 453 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CPA6Q8N4T0 437 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 FAM71DQ8N9W8 422 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CCDC26Q8TAB7 109 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 ARHGEF2Q92974 986 aaKnown RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 RUNDC3BQ96NL0 473 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 RHOXF2Q9BQY4 288 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 LRRC1Q9BTT6 524 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CEP41Q9BYV8 373 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 MAGEH1Q9H213 219 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 ECT2Q9H8V3 914 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 ABCB8Q9NUT2 735 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 GTSE1Q9NYZ3 720 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 LIMD1Q9UGP4 676 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 IPO11Q9UI26 975 aaKnown RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 VPS28Q9UK41 221 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 MYO10Q9HD67 2058 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 BCLAF3A2AJT9 711 aaKnown RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 KCNK1O00180 336 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CHADO15335 359 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 GAS8O95995 478 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CD70P32970 193 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 VPS41P49754 854 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 LMNB2Q03252 620 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 DHX34Q14147 1143 aaKnown RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 AAK1Q2M2I8 961 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 RNF43Q68DV7 783 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CCDC70Q6NSX1 233 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 JAMLQ86YT9 394 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CCDC13Q8IYE1 715 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 ALLCQ8N6M5 410 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 CCDC89Q8N998 374 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 FIBINQ8TAL6 211 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 HTR3CQ8WXA8 447 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 BRD9Q9H8M2 597 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 FAM50BQ9Y247 325 aa14.97□□□□□ -0.01
TNF-208ENST00000449264 DRG1Q9Y295 367 aaKnown RBP14.97□□□□□ -0.01
TNF-208ENST00000449264 KIAA1549LQ6ZVL6 1849 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 CFAP69A5D8W1 941 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 J3KR12 359 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 CBX4O00257 560 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 HOXC11O43248 304 aaPredicted RBP14.96□□□□□ -0.01
TNF-208ENST00000449264 MAFKO60675 156 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms