RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RPS14P62263 151 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 BNC1Q01954 994 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 PTPRNQ16849 979 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 TTC31Q49AM3 519 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 CCDC122Q5T0U0 273 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ACAD10Q6JQN1 1059 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 PROSER1Q86XN7 944 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 CCDC117Q8IWD4 279 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 PNPLA1Q8N8W4 532 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 FIBINQ8TAL6 211 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 RHBDD1Q8TEB9 315 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 CLEC4CQ8WTT0 213 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 SNX19Q92543 992 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 TTC17Q96AE7 1141 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 C11orf70Q9BRQ4 267 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 C6orf106Q9H6K1 298 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 IL21RQ9HBE5 538 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 CEP83Q9Y592 693 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 ATRXP46100 2492 aa14.2□□□□□ -0.14
PDLIM2-213ENST00000448520 A0A1B0GVT2 93 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 E5RJQ4 531 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 MSI1O43347 362 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 DFNA5O60443 496 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 RNASEH1O60930 286 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 NDUFA10O95299 355 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 GJB6O95452 261 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 LSM8O95777 96 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 ASLP04424 464 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 CD27P26842 260 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 GRIA4P48058 902 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 CENPCQ03188 943 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 SCAPQ12770 1279 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 PTP4A2Q12974 167 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 NNTQ13423 1086 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 SLC18A3Q16572 532 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 ZNF776Q68DI1 518 aaPredicted RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 ALKBH5Q6P6C2 394 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 RFWD3Q6PCD5 774 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 USP30Q70CQ3 517 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 SLCO6A1Q86UG4 719 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 VPS36Q86VN1 386 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 CACUL1Q86Y37 369 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 KDM1BQ8NB78 822 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 PPP1R13BQ96KQ4 1090 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 SLC4A5Q9BY07 1137 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 MIS12Q9H081 205 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 FNDC3AQ9Y2H6 1198 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 EPN1Q9Y6I3 576 aaPredicted RBP14.19□□□□□ -0.14
PDLIM2-213ENST00000448520 ANKRD11Q6UB99 2663 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 ZFYVE26Q68DK2 2539 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 TAF4O00268 1085 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 SART1O43290 800 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 FTLP02792 175 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 ABCB4P21439 1286 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 CD70P32970 193 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 ACADSBP45954 432 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 NSFP46459 744 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 KIF19Q2TAC6 998 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 FAM133BQ5BKY9 247 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 MON1BQ7L1V2 547 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 BEND5Q7L4P6 421 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 TMPRSS7Q7RTY8 843 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 MFN1Q8IWA4 741 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 ZNF366Q8N895 744 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 HJURPQ8NCD3 748 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 CCDC112Q8NEF3 446 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 BAHD1Q8TBE0 780 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 IGSF8Q969P0 613 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 SKA1Q96BD8 255 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 BIRC7Q96CA5 298 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 LMLNQ96KR4 655 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 SERPINB11Q96P15 392 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 TRIM62Q9BVG3 475 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 RSPH9Q9H1X1 276 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 CCDC86Q9H6F5 360 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 TM9SF3Q9HD45 589 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 STIM2Q9P246 746 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 PYCARDQ9ULZ3 195 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 LHX6Q9UPM6 363 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 TLR6Q9Y2C9 796 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 PTPRBP23467 1997 aa14.18□□□□□ -0.14
PDLIM2-213ENST00000448520 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 GOLGA6L7A0A1B0GV03 622 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 TARSL2A2RTX5 802 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 RCCD1A6NED2 376 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 GOLGA8SH3BPF8 625 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 PAPSS1O43252 624 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 PCDHGA12O60330 932 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 RTN2O75298 545 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 MOCS3O95396 460 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 MMP8P22894 467 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 SLC6A4P31645 630 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 CYLC1P35663 651 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 RPL34P49207 117 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 SGSHP51688 502 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms