RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 ATP2A3Q93084 1043 aa11.71□□□□□ -0.53
GNE-203ENST00000447283 C18orf25Q96B23 403 aaPredicted RBP11.71□□□□□ -0.53
GNE-203ENST00000447283 TRIM4Q9C037 500 aa11.71□□□□□ -0.53
GNE-203ENST00000447283 MCOLN1Q9GZU1 580 aa11.71□□□□□ -0.53
GNE-203ENST00000447283 VCX3BQ9H321 246 aa11.71□□□□□ -0.53
GNE-203ENST00000447283 TBC1D30Q9Y2I9 924 aa11.71□□□□□ -0.53
GNE-203ENST00000447283 TPP1O14773 563 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 FDFT1P37268 417 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 PTPN9P43378 593 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 ERFP50548 548 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 IRX4P78413 519 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 KCNT2Q6UVM3 1135 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 MAVSQ7Z434 540 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 SEPT8Q92599 483 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 ZFP42Q96MM3 310 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 GAD1Q99259 594 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 SORT1Q99523 831 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 DDX50Q9BQ39 737 aaKnown RBP11.71□□□□□ -0.54
GNE-203ENST00000447283 C11orf84Q9BUA3 381 aaPredicted RBP11.71□□□□□ -0.54
GNE-203ENST00000447283 TMEM39AQ9NV64 488 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 CPSF2Q9P2I0 782 aaKnown RBP11.71□□□□□ -0.54
GNE-203ENST00000447283 HESX1Q9UBX0 185 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.54
GNE-203ENST00000447283 WDR27A2RRH5 827 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 ARL5CA6NH57 179 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 ARHGAP42A6NI28 874 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 C9IYK1 514 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 ZNF195O14628 629 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 PTGESO14684 152 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 PAPSS1O43252 624 aaPredicted RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 RNASEH1O60930 286 aaKnown RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 EOMESO95936 686 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 PROCP04070 461 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 PRKCGP05129 697 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 THP07101 528 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 ZCCHC18P0CG32 403 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 MLH1P40692 756 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 HARS2P49590 506 aaKnown RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 IDH3AP50213 366 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 CCL23P55773 120 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 POLE2P56282 527 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 RPL26P61254 145 aaKnown RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 FAM189BP81408 668 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 CCNIQ14094 377 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 PPP1R26Q5T8A7 1209 aaPredicted RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 LRRC8BQ6P9F7 803 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 RNF111Q6ZNA4 994 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 TTC30AQ86WT1 665 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 ZDHHC17Q8IUH5 632 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 C12orf29Q8N999 325 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 SHKBP1Q8TBC3 707 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 PPP4R1Q8TF05 950 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 SLC35F5Q8WV83 523 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 NCSTNQ92542 709 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 CENPIQ92674 756 aaPredicted RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 SCLYQ96I15 445 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 EIF2B3Q9NR50 452 aaKnown RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
GNE-203ENST00000447283 KIAA0100Q14667 2235 aaKnown RBP11.7□□□□□ -0.54
GNE-203ENST00000447283 A0A0A0MRY4 1105 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 HACD1B0YJ81 288 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 DGKIO75912 1065 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 CLTBP09497 229 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PRDX6P30041 224 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 CYP2C18P33260 490 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 SNX16P57768 344 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 ASPHQ12797 758 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 RALGPS1Q5JS13 557 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 C9orf57Q5W0N0 161 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 ATG14Q6ZNE5 492 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 RASSF3Q86WH2 238 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 LRRC52Q8N7C0 313 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 POU5F2Q8N7G0 328 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PYDC1Q8WXC3 89 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 SPATA13Q96N96 652 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 CSPG4P5Q96PW8 444 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
GNE-203ENST00000447283 NAT9Q9BTE0 207 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 DTLQ9NZJ0 730 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 CDH22Q9UJ99 828 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 SCN1AP35498 2009 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PIRO00625 290 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 ENPP3O14638 875 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 GABBR2O75899 941 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 RTN3O95197 1032 aaPredicted RBP11.69□□□□□ -0.54
GNE-203ENST00000447283 ITGA2BP08514 1039 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 UQCRBP14927 111 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PGAM1P18669 254 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 TFE3P19532 575 aaPredicted RBP11.69□□□□□ -0.54
GNE-203ENST00000447283 ABCE1P61221 599 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms