RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TLR1Q15399 786 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 PDCD2Q16342 344 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-204ENST00000447182 DCUN1D1Q96GG9 259 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 DRC3Q9H069 523 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 Q9H521 79 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 RAB26Q9ULW5 256 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 PAPPA2Q9BXP8 1791 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 MAGEB16A2A368 324 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 TXNDC9O14530 226 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 XPO1O14980 1071 aaKnown RBP19.46■□□□□ 0.71
SDCBP-204ENST00000447182 LTFP02788 710 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 PDGFRBP09619 1106 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 PTPN3P26045 913 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 NOS2P35228 1153 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 SERPINB5P36952 375 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 NUDT2P50583 147 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 OLIG2Q13516 323 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 PIGGQ5H8A4 983 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 KCTD11Q693B1 232 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 DSELQ8IZU8 1212 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 CATSPER1Q8NEC5 780 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 SLC2A14Q8TDB8 520 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 C18orf25Q96B23 403 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-204ENST00000447182 ATXN7L3BQ96GX2 97 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 GCNAQ96QF7 691 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 NPY6RQ99463 290 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 NDNQ99608 321 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 ZNF385DQ9H6B1 395 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 KLHL8Q9P2G9 620 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-204ENST00000447182 RBPJLQ9UBG7 517 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 BCAP29Q9UHQ4 241 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 ATP9BO43861 1147 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 DNAJA2O60884 412 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 LMO2P25791 158 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 HOXA11P31270 313 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-204ENST00000447182 RPL14P50914 215 aaKnown RBP19.46■□□□□ 0.71
SDCBP-204ENST00000447182 MPP3Q13368 585 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 DLG2Q15700 870 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 ZNF423Q2M1K9 1284 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 Q3C1V9 767 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 HSP90AA5PQ58FG0 334 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 DCAF6Q58WW2 860 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 RARS2Q5T160 578 aaKnown RBP19.46■□□□□ 0.71
SDCBP-204ENST00000447182 SATL1Q86VE3 508 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 SNX32Q86XE0 403 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 AGAP3Q96P47 875 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 CAB39LQ9H9S4 337 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 TMPRSS4Q9NRS4 437 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 CSADQ9Y600 493 aa19.46■□□□□ 0.71
SDCBP-204ENST00000447182 POLR2AP24928 1970 aaKnown RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ASB14A6NK59 587 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 EEF2KO00418 725 aaKnown RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 AIM2O14862 343 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 CREB3O43889 395 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 GTF2A2P52657 109 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 HERC3Q15034 1050 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 LSM12Q3MHD2 195 aaKnown RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 FBXO47Q5MNV8 452 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 LIPMQ5VYY2 423 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 SEL1L3Q68CR1 1132 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ALKAL1Q6UXT8 129 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ZYG11AQ6WRX3 759 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 BNC2Q6ZN30 1099 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 LCA5Q86VQ0 697 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 TICAM1Q8IUC6 712 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 FAM149B1Q96BN6 582 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PGLYRP2Q96PD5 576 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 DNAI2Q9GZS0 605 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 SETD4Q9NVD3 440 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 GDAP2Q9NXN4 497 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 GPRC5DQ9NZD1 345 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ANKRD6Q9Y2G4 727 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 KCNK1O00180 336 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PIRO00625 290 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 CAPNS1P04632 268 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 CHRNGP07510 517 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 CYP2C9P11712 490 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 MPSTP25325 297 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PPARGP37231 505 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 THOP1P52888 689 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PITX1P78337 314 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 CYLC2Q14093 348 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ADGRE1Q14246 886 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PDZD4Q76G19 769 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PIGZQ86VD9 579 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 KCNMB4Q86W47 210 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 TMEM151AQ8N4L1 468 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ADCY4Q8NFM4 1077 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PPTC7Q8NI37 304 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 DGCR14Q96DF8 476 aaKnown RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 VPS39Q96JC1 886 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PRICKLE1Q96MT3 831 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 ACE2Q9BYF1 805 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 IL22Q9GZX6 179 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 WDR55Q9H6Y2 383 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-204ENST00000447182 PLK2Q9NYY3 685 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 RIMS3Q9UJD0 308 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 STAP1Q9ULZ2 295 aa19.45■□□□□ 0.7
SDCBP-204ENST00000447182 OTOFQ9HC10 1997 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 SLCO1B7G3V0H7 640 aa19.44■□□□□ 0.7
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