RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 SPATA22Q8NHS9 363 aa16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 RFWD2Q8NHY2 731 aa16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 LRRC37BQ96QE4 947 aa16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 ELAC1Q9H777 363 aaKnown RBP16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 CHKBQ9Y259 395 aa16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 TLR6Q9Y2C9 796 aa16.31■□□□□ 0.2
CCDC144B-202ENST00000445752 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 MAFKO60675 156 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ALDOAP04075 364 aaKnown RBP16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 HTR7P34969 479 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 SLC11A1P49279 550 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 PDE1BQ01064 536 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ZNF33AQ06730 810 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 EFEMP1Q12805 493 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ARTNQ5T4W7 220 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 PIK3R6Q5UE93 754 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 TBC1D1Q86TI0 1168 aaPredicted RBP16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 LZTR1Q8N653 840 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 MFSD3Q96ES6 412 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 TSGA13Q96PP4 275 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 DCTN3O75935 186 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 USP1O94782 785 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 CDK7P50613 346 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 TBX4P57082 545 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 IRX4P78413 519 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 MRPL58Q14197 206 aaKnown RBP16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 MGAT5BQ3V5L5 792 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ANKRD20A4Q4UJ75 823 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 TMEM135Q86UB9 458 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ARHGAP18Q8N392 663 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 FBXO32Q969P5 355 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 ZNF419Q96HQ0 510 aaPredicted RBP16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 TRIM55Q9BYV6 548 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 CHRAC1Q9NRG0 131 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 MARCH5Q9NX47 278 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 PLXNA3P51805 1871 aa16.3■□□□□ 0.2
CCDC144B-202ENST00000445752 A0A0G2JND7 137 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 OR6C75A6NL08 312 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 TBX18O95935 607 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 MT-CYBP00156 380 aaPredicted RBP16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 F7P08709 466 aaPredicted RBP16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 YWHAQP27348 245 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 HNRNPH1P31943 449 aaKnown RBP16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 GP5P40197 560 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 MAGEA11P43364 429 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 NPY2RP49146 381 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 TCTN1Q2MV58 587 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 NLRP9Q7RTR0 991 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 RTL3Q8N8U3 475 aaKnown RBP16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 SEPT8Q92599 483 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 ATXN7L3BQ96GX2 97 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 IL22Q9GZX6 179 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 KLC4Q9NSK0 619 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 TET1Q8NFU7 2136 aa16.29■□□□□ 0.2
CCDC144B-202ENST00000445752 ZCWPW2A0A1B0GU75 182 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 CCDC78A2IDD5 438 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 MATN3O15232 486 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 FGFR3P22607 806 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 PAPOLAP51003 745 aaKnown RBP16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 TMPRSS15P98073 1019 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 CDH17Q12864 832 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 PDE1CQ14123 709 aaPredicted RBP16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 CHI3L2Q15782 390 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 MSANTD2Q6P1R3 559 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 FUT10Q6P4F1 479 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 CYB5D1Q6P9G0 228 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 RSPO2Q6UXX9 243 aaPredicted RBP16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 TFAP2DQ7Z6R9 452 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 MIB1Q86YT6 1006 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 NUDCD3Q8IVD9 361 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 E2F7Q96AV8 911 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 SLC39A13Q96H72 371 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 AGAP2Q99490 1192 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 CPNE1Q99829 537 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 AAR2Q9Y312 384 aaKnown RBP16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 NYNRINQ9P2P1 1898 aaKnown RBP16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 FAM237BA0A1B0GVD1 139 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 PQBP1O60828 265 aaKnown RBP16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 FKTNO75072 461 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 SLC2A3P11169 496 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 PSMD5Q16401 504 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 HSP90AA5PQ58FG0 334 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 RTP2Q5QGT7 225 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 C16orf46Q6P387 395 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 RNF19BQ6ZMZ0 732 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 STRA8Q7Z7C7 330 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 KIF2BQ8N4N8 673 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 IPMKQ8NFU5 416 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 ACMSDQ8TDX5 336 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 KLHL29Q96CT2 875 aa16.28■□□□□ 0.2
CCDC144B-202ENST00000445752 IL12RB2Q99665 862 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms