RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 MX2P20592 715 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 CCR1P32246 355 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 ARFIP2P53365 341 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 SLC18A1P54219 525 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 STRA8Q7Z7C7 330 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 ACVR1CQ8NER5 493 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 GIPC2Q8TF65 315 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 SCLYQ96I15 445 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 SLC39A8Q9C0K1 460 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 C20orf27Q9GZN8 174 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 SSU72Q9NP77 194 aaKnown RBP17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 IARS2Q9NSE4 1012 aaKnown RBP17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 AP2A1O95782 977 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 ITGA2BP08514 1039 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 NQO1P15559 274 aaKnown RBP17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 NMBRP28336 390 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 CPA2P48052 419 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 PSMD5Q16401 504 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 ALYREFQ86V81 257 aaKnown RBP17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 E2F7Q96AV8 911 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 KLHL5Q96PQ7 755 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 ABCC13Q9NSE7 274 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 IGSF9Q9P2J2 1179 aa17.17■□□□□ 0.34
LAPTM4B-201ENST00000445593 C2CD2LO14523 706 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 AVPR1AP37288 418 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 CHRNA4P43681 627 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 ERFP50548 548 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 TMEM173Q86WV6 379 aaPredicted RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 RGS18Q9NS28 235 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 ZNF180Q9UJW8 692 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 PQBP1O60828 265 aaKnown RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 CCNB1P14635 433 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 CCL23P55773 120 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 GALNT2Q10471 571 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 SEPT6Q14141 434 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 COLGALT2Q8IYK4 626 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 SLC25A41Q8N5S1 370 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 GBA3Q9H227 469 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 GSTA1P08263 222 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 RPL17P18621 184 aaKnown RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 MAPRE1Q15691 268 aaKnown RBP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 HS3ST4Q9Y661 456 aa17.16■□□□□ 0.34
LAPTM4B-201ENST00000445593 TNFRSF10BO14763 440 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 TOMM70O94826 608 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 DHRS4L1P0CG22 281 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 ETFBP38117 255 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 CDK16Q00536 496 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 SNCBQ16143 134 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 DEFB115Q30KQ5 88 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 RGS9BPQ6ZS82 235 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 GBP7Q8N8V2 638 aaPredicted RBP17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 HDAC11Q96DB2 347 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 PGAP3Q96FM1 320 aaPredicted RBP17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 TEKT5Q96M29 485 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 FICDQ9BVA6 458 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 CRISPLD1Q9H336 500 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 CPSF2Q9P2I0 782 aaKnown RBP17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 CNTN5O94779 1100 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 IRF9Q00978 393 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 NIPAL4Q0D2K0 466 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 TRAF7Q6Q0C0 670 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 DEFB128Q7Z7B8 93 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 DCLK2Q8N568 766 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 RBM22Q9NW64 420 aaKnown RBP eCLIP17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 L3MBTL1Q9Y468 752 aa17.15■□□□□ 0.34
LAPTM4B-201ENST00000445593 EME2A4GXA9 379 aaPredicted RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 DNAJC6O75061 913 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 UNC5CO95185 931 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 MLNP12872 115 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 ANKRD20A4Q4UJ75 823 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 FASTKD1Q53R41 847 aaKnown RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 SPATA6LQ8N4H0 392 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 PPP1R12CQ9BZL4 782 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 LRRC40Q9H9A6 602 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 TSC2P49815 1807 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 E9PAM4 449 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 NBNO60934 754 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 DCTN3O75935 186 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 CSPG5O95196 566 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 CST5P28325 142 aaPredicted RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 RCN2Q14257 317 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 C10orf120Q5SQS8 335 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 ITPRIPL1Q6GPH6 555 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 PRSS55Q6UWB4 352 aaPredicted RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 RSPO2Q6UXX9 243 aaPredicted RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 LRRC8DQ7L1W4 858 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 ARHGAP12Q8IWW6 846 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 PLD6Q8N2A8 252 aaKnown RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 IRGQQ8WZA9 623 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 FBXO32Q969P5 355 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms