RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 RTN2O75298 545 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 ERBB2P04626 1255 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 KRT9P35527 623 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 OXCT1P55809 520 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 PPP2CBP62714 309 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 PPP2CAP67775 309 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 CYP4F3Q08477 520 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 BNIP3Q12983 259 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 ZNF177Q13360 481 aaPredicted RBP15.89■□□□□ 0.13
SEC13-213ENST00000445064 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 COL9A2Q14055 689 aaPredicted RBP15.89■□□□□ 0.13
SEC13-213ENST00000445064 INAVAQ3KP66 663 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 POM121L1PQ3SYA9 428 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 TTC39BQ5VTQ0 682 aaPredicted RBP15.89■□□□□ 0.13
SEC13-213ENST00000445064 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
SEC13-213ENST00000445064 C14orf80Q86SX3 495 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 C1orf131Q8NDD1 294 aaKnown RBP15.89■□□□□ 0.13
SEC13-213ENST00000445064 SAP25Q8TEE9 199 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 HNRNPLLQ8WVV9 542 aaKnown RBP15.89■□□□□ 0.13
SEC13-213ENST00000445064 SPAG5Q96R06 1193 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 SIK2Q9H0K1 926 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 PLCB1Q9NQ66 1216 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 GDF3Q9NR23 364 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 ARHGAP20Q9P2F6 1191 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 HS3ST4Q9Y661 456 aa15.89■□□□□ 0.13
SEC13-213ENST00000445064 ADAMTS20P59510 1910 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 M0QYT0 321 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 TLR4O00206 839 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 FOXN3O00409 490 aaPredicted RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 ENC1O14682 589 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 BNIP3LO60238 219 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 PAGE1O75459 146 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 LDOC1O95751 146 aaPredicted RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 PNMA6AP0CW24 399 aaPredicted RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 ZNF18P17022 549 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 MAT2AP31153 395 aaKnown RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 NOS2P35228 1153 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 CLCN1P35523 988 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 MTIF2P46199 727 aaKnown RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 SLC6A3Q01959 620 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 DNAJC3Q13217 504 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 DLG2Q15700 870 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 SMAD1Q15797 465 aaKnown RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 COL28A1Q2UY09 1125 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 OLFML1Q6UWY5 402 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 PRPF39Q86UA1 669 aaKnown RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 EID2Q8N6I1 236 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 OR8D1Q8WZ84 308 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 CNDP2Q96KP4 475 aaKnown RBP15.88■□□□□ 0.13
SEC13-213ENST00000445064 PPP1R9BQ96SB3 815 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 SIX2Q9NPC8 291 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 SLC25A13Q9UJS0 675 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 OR51B4Q9Y5P0 310 aa15.88■□□□□ 0.13
SEC13-213ENST00000445064 TP53BP1Q12888 1972 aaPredicted RBP15.87■□□□□ 0.13
SEC13-213ENST00000445064 NYNRINQ9P2P1 1898 aaKnown RBP15.87■□□□□ 0.13
SEC13-213ENST00000445064 KNL1Q8NG31 2342 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 GTPBP10A4D1E9 387 aaKnown RBP15.87■□□□□ 0.13
SEC13-213ENST00000445064 LATO43561 262 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 ATP9BO43861 1147 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 VASPP50552 380 aaPredicted RBP15.87■□□□□ 0.13
SEC13-213ENST00000445064 CLDN6P56747 220 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 NXPH1P58417 271 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
SEC13-213ENST00000445064 CNTN1Q12860 1018 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 PTPN20Q4JDL3 420 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 SLC45A4Q5BKX6 768 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 FAM46CQ5VWP2 391 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 Q6ZVU0 165 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 DSG4Q86SJ6 1040 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 SLC47A2Q86VL8 602 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 SPATS2Q86XZ4 545 aaKnown RBP15.87■□□□□ 0.13
SEC13-213ENST00000445064 NOX5Q96PH1 765 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 WDCPQ9H6R7 721 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 SYNCQ9H7C4 482 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 ANLNQ9NQW6 1124 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 VPS28Q9UK41 221 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 PPM1HQ9ULR3 514 aa15.87■□□□□ 0.13
SEC13-213ENST00000445064 FAM170AA1A519 330 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 MCF2LO15068 1137 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 PLRG1O43660 514 aaKnown RBP15.86■□□□□ 0.13
SEC13-213ENST00000445064 CLDN11O75508 207 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 DAB1O75553 588 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 CNTN5O94779 1100 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 ADCY5O95622 1261 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 TFE3P19532 575 aaPredicted RBP15.86■□□□□ 0.13
SEC13-213ENST00000445064 ARRB1P49407 418 aaPredicted RBP15.86■□□□□ 0.13
SEC13-213ENST00000445064 SNX16P57768 344 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 TPD52L1Q16890 204 aaPredicted RBP15.86■□□□□ 0.13
SEC13-213ENST00000445064 NAPEPLDQ6IQ20 393 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 SLC26A9Q7LBE3 791 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 SH2D3CQ8N5H7 860 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 PDCD7Q8N8D1 485 aaKnown RBP15.86■□□□□ 0.13
SEC13-213ENST00000445064 MFSD2AQ8NA29 543 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 PIP4K2CQ8TBX8 421 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 FAM131CQ96AQ9 280 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 NPY6RQ99463 290 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 TKTL2Q9H0I9 626 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 MUC3BQ9H195 1237 aa15.86■□□□□ 0.13
SEC13-213ENST00000445064 KDM4CQ9H3R0 1056 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms