RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 CAMK2GQ13555 558 aaPredicted RBP17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 HNRNPA1L2Q32P51 320 aaKnown RBP17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 NLRP14Q86W24 1093 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 CCDC170Q8IYT3 715 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 DCAF4L2Q8NA75 395 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 SUMF1Q8NBK3 374 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 OR2T3Q8NH03 318 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 MYO19Q96H55 970 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 MRGPRX1Q96LB2 322 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 PEBP4Q96S96 227 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 SPON2Q9BUD6 331 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 SNRNP25Q9BV90 132 aaKnown RBP17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 PRDM16Q9HAZ2 1276 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 ATP13A1Q9HD20 1204 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 IMPACTQ9P2X3 320 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 DNAI1Q9UI46 699 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 SLCO3A1Q9UIG8 710 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 NEU3Q9UQ49 428 aa17.9■□□□□ 0.46
SMARCAL1-209ENST00000444508 A0A0D9SEW6 157 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 EDDM13A0A1B0GTR0 161 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 TTC34A8MYJ7 566 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 EEF2KO00418 725 aaKnown RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 GFRA3O60609 400 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZNF217O75362 1048 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 P2RY2P41231 377 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 SSR1P43307 286 aaKnown RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 MRE11P49959 708 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 SEMA3BQ13214 749 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 SPA17Q15506 151 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 LPAL2Q16609 132 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 BOLA3Q53S33 107 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 PPP6R3Q5H9R7 873 aaPredicted RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 DAB2IPQ5VWQ8 1189 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 TMPRSS6Q8IU80 811 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 TMTC1Q8IUR5 882 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 RHOT2Q8IXI1 618 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 RTL3Q8N8U3 475 aaKnown RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 PRCCQ92733 491 aaPredicted RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 SIPA1Q96FS4 1042 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 SLC6A17Q9H1V8 727 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 LUC7LQ9NQ29 371 aaKnown RBP17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 PRSS16Q9NQE7 514 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 DONSONQ9NYP3 566 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 INTUQ9ULD6 942 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 INVSQ9Y283 1065 aa17.89■□□□□ 0.45
SMARCAL1-209ENST00000444508 TARSL2A2RTX5 802 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 DCLK1O15075 740 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 MAP3K13O43283 966 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 DAPK3O43293 454 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 RAMP2O60895 175 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 RNASEH1O60930 286 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 ACADMP11310 421 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 VASPP50552 380 aaPredicted RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZNF135P52742 658 aaPredicted RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 COPAP53621 1224 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 ELF2Q15723 593 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 CA9Q16790 459 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 HADHQ16836 314 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 IL31Q6EBC2 164 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 RETSATQ6NUM9 610 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 ASCL5Q7RTU5 278 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 SPC24Q8NBT2 197 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 OR7D4Q8NG98 312 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 SLC35G2Q8TBE7 412 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 RLN3Q8WXF3 142 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 KCTD15Q96SI1 283 aaPredicted RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 PSMB7Q99436 277 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 MKRN2Q9H000 416 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 MAGEH1Q9H213 219 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZWILCHQ9H900 591 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 NCDNQ9UBB6 729 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 VPS51Q9UID3 782 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 GMEB2Q9UKD1 530 aa17.88■□□□□ 0.45
SMARCAL1-209ENST00000444508 SPAG17Q6Q759 2223 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 CBX4O00257 560 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 SNAP91O60641 907 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 SIN3BO75182 1162 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 PROSCO94903 275 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 IPO7O95373 1038 aaKnown RBP17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 IL1R2P27930 398 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 MAGEA1P43355 309 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 POLD3Q15054 466 aaPredicted RBP17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 SMTNL2Q2TAL5 461 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 MAP7D1Q3KQU3 841 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 ACCSLQ4AC99 568 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 KCNT1Q5JUK3 1230 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 LAIR1Q6GTX8 287 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 CYP4V2Q6ZWL3 525 aaPredicted RBP17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 METTL3Q86U44 580 aaKnown RBP17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 ALYREFQ86V81 257 aaKnown RBP17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 KBTBD6Q86V97 674 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 CACUL1Q86Y37 369 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 ATP11CQ8NB49 1132 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 TEKT4Q8WW24 435 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 RFFLQ8WZ73 363 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 HSPH1Q92598 858 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 HINFPQ9BQA5 517 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 MTG2Q9H4K7 406 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms