RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DQX1Q8TE96 717 aaKnown RBP14.86□□□□□ -0.03
HMGN1-208ENST00000443046 POLR1BQ9H9Y6 1135 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 KLHL11Q9NVR0 708 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 XPO7Q9UIA9 1087 aaKnown RBP14.86□□□□□ -0.03
HMGN1-208ENST00000443046 PPM1HQ9ULR3 514 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 MAPK8IP1Q9UQF2 711 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 U3KQA8 63 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 USP12O75317 370 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 PFKFB1P16118 471 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 CMA1P23946 247 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 RPL34P49207 117 aaKnown RBP14.85□□□□□ -0.03
HMGN1-208ENST00000443046 TAS2R38P59533 333 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 DAB2P98082 770 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 VAC14Q08AM6 782 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 KCNMA1Q12791 1236 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 CNTN1Q12860 1018 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 DPYDQ12882 1025 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 FOXD4L6Q3SYB3 417 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-208ENST00000443046 SETMARQ53H47 684 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-208ENST00000443046 RNF219Q5W0B1 726 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-208ENST00000443046 FOXD4L3Q6VB84 417 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-208ENST00000443046 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 CCDC117Q8IWD4 279 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-208ENST00000443046 KCNE4Q8WWG9 221 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 KLHDC7BQ96G42 594 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 HSFY1Q96LI6 401 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 SERPINB11Q96P15 392 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 DEPDC7Q96QD5 511 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 CA5BQ9Y2D0 317 aa14.85□□□□□ -0.03
HMGN1-208ENST00000443046 A0A1B0GVL5 298 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 A0A1W2PNU3 283 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-208ENST00000443046 K7ELQ4 463 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-208ENST00000443046 PIK3R2O00459 728 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 CSO75390 466 aaKnown RBP14.84□□□□□ -0.03
HMGN1-208ENST00000443046 FBXO21O94952 628 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 PAEPP09466 180 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 ZSCAN22P10073 491 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-208ENST00000443046 YWHAEP62258 255 aaKnown RBP14.84□□□□□ -0.03
HMGN1-208ENST00000443046 KCNC4Q03721 635 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 SULT2A1Q06520 285 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 EIF4EBP2Q13542 120 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-208ENST00000443046 CNGA2Q16280 664 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 LGI2Q8N0V4 545 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 MED8Q96G25 268 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 APOLD1Q96LR9 279 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 CAAP1Q9H8G2 361 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 PREBQ9HCU5 417 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 NAALADL1Q9UQQ1 740 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 CEP83Q9Y592 693 aa14.84□□□□□ -0.03
HMGN1-208ENST00000443046 FAM237AA0A1B0GTK4 181 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 MCF2LO15068 1137 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 ALOX15BO15296 676 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 ARHGAP6O43182 974 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 KLK10O43240 276 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 ATP9BO43861 1147 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 PIAS2O75928 621 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 WISP1O95388 367 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 F13A1P00488 732 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 THEGLP0DJG4 465 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 TACR2P21452 398 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 NNMTP40261 264 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 FOXD4L5Q5VV16 416 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-208ENST00000443046 FAM46CQ5VWP2 391 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 TMC6Q7Z403 805 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 DSG4Q86SJ6 1040 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-208ENST00000443046 ALG14Q96F25 216 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 IFT43Q96FT9 208 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 VCPIP1Q96JH7 1222 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 PRMT1Q99873 361 aaKnown RBP14.83□□□□□ -0.04
HMGN1-208ENST00000443046 USP29Q9HBJ7 922 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 THSD1Q9NS62 852 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 NLGN3Q9NZ94 848 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 TJP2Q9UDY2 1190 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 CFAP45Q9UL16 551 aa14.83□□□□□ -0.04
HMGN1-208ENST00000443046 TLN1Q9Y490 2541 aaKnown RBP14.83□□□□□ -0.04
HMGN1-208ENST00000443046 PYCARD-AS1I3L0S3 204 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 K7ENP7 123 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 RNF225M0QZC1 329 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-208ENST00000443046 FFAR2O15552 330 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 MOCS2O96007 188 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-208ENST00000443046 IGLV3-25P01717 112 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-208ENST00000443046 ISXQ2M1V0 245 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 PIP5KL1Q5T9C9 394 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 SYPL2Q5VXT5 272 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 RAP1GAP2Q684P5 730 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 CXorf57Q6NSI4 855 aaKnown RBP14.82□□□□□ -0.04
HMGN1-208ENST00000443046 NEK5Q6P3R8 708 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 INO80CQ6PI98 192 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-208ENST00000443046 TAC4Q86UU9 113 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 OR8D1Q8WZ84 308 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 PRR11Q96HE9 360 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-208ENST00000443046 BTN2A3PQ96KV6 586 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 SLC46A1Q96NT5 459 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 GPR27Q9NS67 375 aa14.82□□□□□ -0.04
HMGN1-208ENST00000443046 KIF26BQ2KJY2 2108 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 M0QYV0 167 aa14.81□□□□□ -0.04
HMGN1-208ENST00000443046 SCAMP1O15126 338 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms