RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 RCN3Q96D15 328 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 RTP4Q96DX8 246 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 KCNK16Q96T55 309 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 MED10Q9BTT4 135 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 PIGVQ9NUD9 493 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 DDX18Q9NVP1 670 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 NUDT5Q9UKK9 219 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 RPL26L1Q9UNX3 145 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 ZBTB24O43167 697 aaPredicted RBP13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 SRGAP2BP0DMP2 458 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 VCLP18206 1134 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 AOC1P19801 751 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 THOP1P52888 689 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 BEX3Q00994 111 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 INCA1Q0VD86 236 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 KLF10Q13118 480 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 SEMA5AQ13591 1074 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 MCUQ8NE86 351 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 NPAS2Q99743 824 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 DOCK3Q8IZD9 2030 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 C9JVG2 144 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 C2P06681 752 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 TSHRP16473 764 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 RPL10P27635 214 aaKnown RBP13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 NMBRP28336 390 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 SERPINB9P50453 376 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 NRF1Q16656 503 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 C6orf52Q5T4I8 152 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 DPP9Q86TI2 863 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 PCDH20Q8N6Y1 951 aaKnown RBP13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 SHCBP1Q8NEM2 672 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 GATA5Q9BWX5 397 aaPredicted RBP13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 FTHL17Q9BXU8 183 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 KLHL4Q9C0H6 718 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 SIK2Q9H0K1 926 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 ASB7Q9H672 318 aa13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 GMPR2Q9P2T1 348 aaKnown RBP13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
SLC48A1-201ENST00000442218 F8W8V4 182 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ZNF195O14628 629 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 NRP1O14786 923 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 MDM4O15151 490 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ROR2Q01974 943 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 FOLH1Q04609 750 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 POU6F1Q14863 301 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PDK1Q15118 436 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PKDCCQ504Y2 493 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 DENND6AQ8IWF6 608 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 NPWQ8N729 165 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 UBE2OQ9C0C9 1292 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ITGA11Q9UKX5 1188 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 CCL22O00626 93 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PIGNO95427 931 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 MT-CYBP00156 380 aaPredicted RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 POLBP06746 335 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 HNRNPLP14866 589 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 DESP17661 470 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 CRABP2P29373 138 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 NME5P56597 212 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 MS4A2Q01362 244 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PDK3Q15120 406 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 TLR1Q15399 786 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ZNF792Q3KQV3 632 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 LIN52Q52LA3 116 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ARHGAP36Q6ZRI8 547 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 VANGL2Q9ULK5 521 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 HEMK1Q9Y5R4 338 aaPredicted RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 TTC3P53804 2025 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 BIRC5O15392 142 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 JCHAINP01591 159 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ERCC2P18074 760 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PGAM1P18669 254 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 TPSB2P20231 275 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PMLP29590 882 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ATICP31939 592 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ZBTB17Q13105 803 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 GRM3Q14832 879 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 TPSAB1Q15661 275 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 ANKRD23Q86SG2 305 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 SLC41A1Q8IVJ1 513 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PPP2R3CQ969Q6 453 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 TCF7L2Q9NQB0 619 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms