RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 DBNDD1Q9H9R9 158 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 SCPEP1Q9HB40 452 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 SLC22A11Q9NSA0 550 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 EHD2Q9NZN4 543 aa4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 EIF2B4Q9UI10 523 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 SOS1Q07889 1333 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-207ENST00000441725 TEX13CA0A0J9YWL9 993 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 C3orf70A6NLC5 250 aaPredicted RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 PSMD9O00233 223 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 ENTPD3O75355 529 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 OR2C1O95371 312 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 ALDOAP04075 364 aaKnown RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 CFIP05156 583 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 RHOP08100 348 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 NEFHP12036 1026 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 PRPH2P23942 346 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 TTKP33981 857 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 DMTNQ08495 405 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMED1Q13445 227 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 PRPF4BQ13523 1007 aaKnown RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 SCARB2Q14108 478 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 CYP1B1Q16678 543 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 AP5B1Q2VPB7 878 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 PLEKHS1Q5SXH7 462 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 KLHL35Q6PF15 583 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 HTR3DQ70Z44 454 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 GDF7Q7Z4P5 450 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 DTX2Q86UW9 622 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 GSPT2Q8IYD1 628 aaKnown RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADGRF2Q8IZF7 708 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 CARNMT1Q8N4J0 409 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 NAT8LQ8N9F0 302 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPR150Q8NGU9 434 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 RAB40AQ8WXH6 277 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 ARHGEF2Q92974 986 aaKnown RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZNF764Q96H86 408 aaPredicted RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 CMTM3Q96MX0 182 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 PRR25Q96S07 402 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 DESI2Q9BSY9 194 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 RWDD1Q9H446 243 aaPredicted RBP4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 INTS13Q9NVM9 706 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 TRPM5Q9NZQ8 1165 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 MKLN1Q9UL63 735 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 MAP3K2Q9Y2U5 619 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADAM18Q9Y3Q7 739 aa4.34□□□□□ -1.72
CDC42BPA-207ENST00000441725 FRMD3A2A2Y4 597 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 DIRC3C9JPN6 131 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 HNRNPCL1O60812 293 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 MED14OSP0DP75 135 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 CREB1P16220 341 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADRA1DP25100 572 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GKP32189 559 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ARL1P40616 181 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 UBXN2AP68543 259 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 OLR1P78380 273 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 RAE1P78406 368 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 BYSLQ13895 437 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLMAPQ14BN4 828 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 CDC73Q6P1J9 531 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 MAMDC4Q6UXC1 1216 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 Q6ZRM9 215 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 CHST9Q7L1S5 443 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 CATSPER4Q7RTX7 472 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 LINC00346Q8IVM7 164 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 SCN4BQ8IWT1 228 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 FUKQ8N0W3 1084 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 VPS52Q8N1B4 723 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 POU5F2Q8N7G0 328 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 Q8NFD4 153 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 OR52L2PQ8NGH6 319 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 XAGE5Q8WWM1 108 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 RNF31Q96EP0 1072 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 UROC1Q96N76 676 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 DCLRE1CQ96SD1 692 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 LZTS2Q9BRK4 669 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 KAT14Q9H8E8 782 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 PEMTQ9UBM1 199 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 HSPB7Q9UBY9 170 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GTF3C4Q9UKN8 822 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 IL16Q14005 1332 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 C16orf96A6NNT2 1141 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GRXCR1A8MXD5 290 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GCOM1H8Y6P7 765 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 SNAP23O00161 211 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 TP73O15350 636 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 NOBOXO60393 691 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 MBPP02686 304 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 IL6RP08887 468 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 CYP4B1P13584 511 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZNF37AP17032 561 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 MCM3P25205 808 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLURP1P55000 103 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 B4GALNT1Q00973 533 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 AIMP1Q12904 312 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ALKBH1Q13686 389 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 KYNUQ16719 465 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 RAB41Q5JT25 222 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZNF362Q5T0B9 420 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms