RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SPOUT1Q5T280 376 aaKnown RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 RSPO2Q6UXX9 243 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 SRLQ86TD4 932 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 RASSF3Q86WH2 238 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 CHSY1Q86X52 802 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 CCDC117Q8IWD4 279 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 LRRC34Q8IZ02 419 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 ZNF683Q8IZ20 524 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 MPP5Q8N3R9 675 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 BANPQ8N9N5 519 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 NETO2Q8NC67 525 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 GDAP1Q8TB36 358 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 DENND1AQ8TEH3 1009 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 PLD4Q96BZ4 506 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 GRAMD1AQ96CP6 724 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 SEC16BQ96JE7 1060 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 AGAP3Q96P47 875 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 FCRL5Q96RD9 977 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 MLPHQ9BV36 600 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 IL22Q9GZX6 179 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 IQCGQ9H095 443 aaKnown RBP13.46□□□□□ -0.25
CPSF4-206ENST00000441580 CRISPLD1Q9H336 500 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 HAUS2Q9NVX0 235 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 WBP1LQ9NX94 342 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 MOCS1Q9NZB8 636 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 NUDT5Q9UKK9 219 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 NR2E3Q9Y5X4 410 aa13.46□□□□□ -0.25
CPSF4-206ENST00000441580 KIAA1671Q9BY89 1806 aa13.46□□□□□ -0.26
CPSF4-206ENST00000441580 TCP11X1B4DZS4 312 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 MAFKO60675 156 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 LPXNO60711 386 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 SPAG7O75391 227 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 SOAT2O75908 522 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 USP1O94782 785 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 UPP2O95045 317 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 JCHAINP01591 159 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 GRIA1P42261 906 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 GJA8P48165 433 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 PPP3CCP48454 512 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 NPY2RP49146 381 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 NEK3P51956 506 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 SLC18A2Q05940 514 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 MPP2Q14168 576 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 QPCTQ16769 361 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 PARP15Q460N3 678 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 PRPF39Q86UA1 669 aaKnown RBP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 DNAAF3Q8N9W5 541 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 DIS3LQ8TF46 1054 aaKnown RBP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 NSMCE1Q8WV22 266 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 ZNF689Q96CS4 500 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 VN1R3Q9BXE9 311 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 SLC39A8Q9C0K1 460 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 SP110Q9HB58 689 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 GLOD4Q9HC38 313 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 DNMT3LQ9UJW3 386 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 RRP15Q9Y3B9 282 aaKnown RBP13.45□□□□□ -0.26
CPSF4-206ENST00000441580 YIPF1Q9Y548 306 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 DOCK4Q8N1I0 1966 aa13.45□□□□□ -0.26
CPSF4-206ENST00000441580 FAM237BA0A1B0GVD1 139 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 A0A1W2PPM1 405 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 MAGEB16A2A368 324 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 FOXO6A8MYZ6 492 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 F5H5T6 163 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 KIAA0355O15063 1070 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 OAS1P00973 400 aaKnown RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 OR1D2P34982 312 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 WDR4P57081 412 aaKnown RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 PPARDQ03181 441 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 TNK2Q07912 1038 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 PLD1Q13393 1074 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 ARTNQ5T4W7 220 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 TIFABQ6ZNK6 161 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 TAS1R1Q7RTX1 841 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 C14orf80Q86SX3 495 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 OR52K1Q8NGK4 314 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 GPR152Q8TDT2 470 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 LRRC8CQ8TDW0 803 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 ARNTL2Q8WYA1 636 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 ZNF669Q96BR6 464 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 CERS2Q96G23 380 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 ZNF512Q96ME7 567 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 TBL1YQ9BQ87 522 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 NACA2Q9H009 215 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 MLXIPLQ9NP71 852 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 NSMCE4AQ9NXX6 385 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 ZFATQ9P243 1243 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms