RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 BPIFB1Q8TDL5 484 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 RSPRY1Q96DX4 576 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TMEM176AQ96HP8 235 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 FNBP1Q96RU3 617 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 MSTO1Q9BUK6 570 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 EIF2AQ9BY44 585 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TRIM4Q9C037 500 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 NDST4Q9H3R1 872 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 FAM124BQ9H5Z6 455 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 GCM1Q9NP62 436 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TOPORSQ9NS56 1045 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SUSD2Q9UGT4 822 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ARMCX3Q9UH62 379 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 CPSF3Q9UKF6 684 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 AGO2Q9UKV8 859 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TPX2Q9ULW0 747 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SIK3Q9Y2K2 1263 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 IPPQ9Y573 584 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 INSL5Q9Y5Q6 135 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TACC2O95359 2948 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ATXN2Q99700 1313 aaKnown RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 FAM149AA5PLN7 773 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ZNF233A6NK53 670 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 KIAA0391O15091 583 aaKnown RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 OGTO15294 1046 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CLDN3O15551 220 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 FLRT2O43155 660 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CBFA2T2O43439 604 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 TRAPPC3O43617 180 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MOSPD3O75425 235 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 NOL4O94818 638 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ERLIN2O94905 339 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ABLIM3O94929 683 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 NPTXRO95502 500 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 FGF19O95750 216 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 HPXP02790 462 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 GYPCP04921 128 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ATXN1LP0C7T5 689 aaKnown RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CXCL8P10145 99 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MCF2P10911 925 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CDK4P11802 303 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 GNSP15586 552 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 TFE3P19532 575 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 SLC9A1P19634 815 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 AXLP30530 894 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MATR3P43243 847 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 GCLMP48507 274 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 FMO5P49326 533 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 OSTNP61366 133 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ROR1Q01973 937 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 RPL6Q02878 288 aaKnown RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 UBXN1Q04323 297 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CCDC173Q0VFZ6 552 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 RUNX3Q13761 415 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 RTP5Q14D33 572 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 SYCP1Q15431 976 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 PLEKHG6Q3KR16 790 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 PRAMEF13Q5VWM6 474 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 TPGS2Q68CL5 300 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 LETMD1Q6P1Q0 360 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 NOTUMQ6P988 496 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 SLC36A4Q6YBV0 504 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MRPL41Q8IXM3 137 aaKnown RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 EFCAB13Q8IY85 973 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ANKRD20A12PQ8NF67 263 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MDGA1Q8NFP4 955 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 OR5B17Q8NGF7 314 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 OR2I1PQ8NGU4 316 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 LMO3Q8TAP4 145 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 BAHD1Q8TBE0 780 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 PARD3BQ8TEW8 1205 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 SEMA4DQ92854 862 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ERGIC2Q96RQ1 377 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 LGMNQ99538 433 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 P2RY13Q9BPV8 354 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CRACR2AQ9BSW2 395 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 SGPP1Q9BX95 441 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 TTYH3Q9C0H2 523 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 GANQ9H2C0 597 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MMRN2Q9H8L6 949 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 PRDM16Q9HAZ2 1276 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 CYP4F11Q9HBI6 524 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 PDE11AQ9HCR9 933 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 SIX2Q9NPC8 291 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 FSCN3Q9NQT6 498 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 POLR3BQ9NW08 1133 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MIOSQ9NXC5 875 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 RBAKQ9NYW8 714 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ZMYM5Q9UJ78 669 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 AJAP1Q9UKB5 411 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MAFFQ9ULX9 164 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 FRMD4BQ9Y2L6 1034 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 HES2Q9Y543 173 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 MYH11P35749 1972 aa5.05□□□□□ -1.6
PTPN4-206ENST00000441089 ITIH6Q6UXX5 1313 aa5.04□□□□□ -1.6
PTPN4-206ENST00000441089 A0A1W2PQC6 194 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms