RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MANEALQ5VSG8 457 aa24.28■■□□□ 1.48
VARS-217ENST00000440048 SETD3Q86TU7 594 aaPredicted RBP24.28■■□□□ 1.48
VARS-217ENST00000440048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.28■■□□□ 1.48
VARS-217ENST00000440048 ISCUQ9H1K1 167 aa24.28■■□□□ 1.48
VARS-217ENST00000440048 CNOT8Q9UFF9 292 aaKnown RBP24.28■■□□□ 1.48
VARS-217ENST00000440048 ADAMTS1Q9UHI8 967 aa24.28■■□□□ 1.48
VARS-217ENST00000440048 NUMA1Q14980 2115 aa24.28■■□□□ 1.48
VARS-217ENST00000440048 EDDM13A0A1B0GTR0 161 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 TARSL2A2RTX5 802 aaKnown RBP24.27■■□□□ 1.48
VARS-217ENST00000440048 FAM72CH0Y354 149 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 NDUFS2O75306 463 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 IGLV3-19P01714 112 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 OR1E1P30953 314 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 NNMTP40261 264 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 PI4KAP42356 2102 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 SCAPQ12770 1279 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 C6orf118Q5T5N4 469 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 FAM72AQ5TYM5 149 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 LYSMD4Q5XG99 296 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 SPECC1LQ69YQ0 1117 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 FAM72DQ6L9T8 149 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 SCYL2Q6P3W7 929 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 TMC6Q7Z403 805 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 SLFN11Q7Z7L1 901 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 FAM72BQ86X60 149 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 PIGKQ92643 395 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 ZNF653Q96CK0 615 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 TOE1Q96GM8 510 aaKnown RBP24.27■■□□□ 1.48
VARS-217ENST00000440048 PSMB7Q99436 277 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 RSPH9Q9H1X1 276 aaPredicted RBP24.27■■□□□ 1.48
VARS-217ENST00000440048 WSB2Q9NYS7 404 aaPredicted RBP24.27■■□□□ 1.48
VARS-217ENST00000440048 SLC25A13Q9UJS0 675 aa24.27■■□□□ 1.48
VARS-217ENST00000440048 CDV3Q9UKY7 258 aaKnown RBP24.27■■□□□ 1.48
VARS-217ENST00000440048 CNOT1A5YKK6 2376 aaKnown RBP24.27■■□□□ 1.48
VARS-217ENST00000440048 A0A0D9SEW6 157 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 TMEM191CA6NGB0 347 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 OXTRP30559 389 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 VASPP50552 380 aaPredicted RBP24.26■■□□□ 1.47
VARS-217ENST00000440048 ZNF776Q68DI1 518 aaPredicted RBP24.26■■□□□ 1.47
VARS-217ENST00000440048 DGLUCYQ7Z3D6 616 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 VPS36Q86VN1 386 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 SLC41A1Q8IVJ1 513 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 TRIM11Q96F44 468 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 DNAH14Q0VDD8 3507 aa24.26■■□□□ 1.47
VARS-217ENST00000440048 LRIG2O94898 1065 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 MYBL1P10243 752 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 DESP17661 470 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 PSMA2P25787 234 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 ZBTB16Q05516 673 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 ZNF33AQ06730 810 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 TCEAL6Q6IPX3 200 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 RWDD4Q6NW29 188 aaKnown RBP24.25■■□□□ 1.47
VARS-217ENST00000440048 C12orf50Q8NA57 414 aaPredicted RBP24.25■■□□□ 1.47
VARS-217ENST00000440048 FRS2Q8WU20 508 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 PTPRN2Q92932 1015 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 TCEAL3Q969E4 200 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 TRIM7Q9C029 511 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 ARHGAP20Q9P2F6 1191 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 MYO1AQ9UBC5 1043 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 NEU3Q9UQ49 428 aa24.25■■□□□ 1.47
VARS-217ENST00000440048 CHD5Q8TDI0 1954 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 A0A087X0T9 212 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 ILVBLA1L0T0 632 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 ATP9BO43861 1147 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 SNAP91O60641 907 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 DNTTP04053 509 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 FAM228BP0C875 321 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 VAV1P15498 845 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 ITPKAP23677 461 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 HNRNPH3P31942 346 aaKnown RBP24.24■■□□□ 1.47
VARS-217ENST00000440048 KRT83P78385 493 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 ZNF252P-AS1Q0IIN9 211 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 TRIM14Q14142 442 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 EFHC2Q5JST6 749 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 ZNF783Q6ZMS7 281 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 FAM124AQ86V42 546 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 SYT12Q8IV01 421 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 VSTM4Q8IW00 320 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 DRC7Q8IY82 874 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 PYROXD2Q8N2H3 581 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 STK40Q8N2I9 435 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 OR7D4Q8NG98 312 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 NETO1Q8TDF5 533 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 TBC1D31Q96DN5 1066 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 ZNF419Q96HQ0 510 aaPredicted RBP24.24■■□□□ 1.47
VARS-217ENST00000440048 HSPA12BQ96MM6 686 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 FAM129BQ96TA1 746 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 RTKNQ9BST9 563 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 C2orf49Q9BVC5 232 aaPredicted RBP24.24■■□□□ 1.47
VARS-217ENST00000440048 GPR174Q9BXC1 333 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 TMEM74BQ9NUR3 256 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 VPS51Q9UID3 782 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 FZD10Q9ULW2 581 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 SCINQ9Y6U3 715 aa24.24■■□□□ 1.47
VARS-217ENST00000440048 GDF9O60383 454 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 RNASEH1O60930 286 aaKnown RBP24.23■■□□□ 1.47
VARS-217ENST00000440048 RHOQP17081 205 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 L1CAMP32004 1257 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 AIF1P55008 147 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 AASDHQ4L235 1098 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms