RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 SLC45A4Q5BKX6 768 aa11.79□□□□□ -0.52
CCBE1-202ENST00000439986 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
CCBE1-202ENST00000439986 MFSD7Q6UXD7 560 aa11.79□□□□□ -0.52
CCBE1-202ENST00000439986 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
CCBE1-202ENST00000439986 IARS2Q9NSE4 1012 aaKnown RBP11.79□□□□□ -0.52
CCBE1-202ENST00000439986 TRNAU1APQ9NX07 287 aaKnown RBP11.79□□□□□ -0.52
CCBE1-202ENST00000439986 NOL4O94818 638 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 SPAM1P38567 509 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 DLG4P78352 724 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PPP3CAQ08209 521 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 CCDC103Q8IW40 242 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 CENPLQ8N0S6 344 aaPredicted RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PPP2R3CQ969Q6 453 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 MALT1Q9UDY8 824 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 C17orf102A2RUQ5 167 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 H3BM21 787 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 VWA5AO00534 786 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 CDH2P19022 906 aaPredicted RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 CYP51A1Q16850 503 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 LACTB2Q53H82 288 aaPredicted RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ANKRD26P1Q6NSI1 321 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 FOXR2Q6PJQ5 311 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 AKAP14Q86UN6 197 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ZNF786Q8N393 782 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ETNPPLQ8TBG4 499 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 KLHL4Q9C0H6 718 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ERVK-5Q9HDB9 667 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 SAGE1Q9NXZ1 904 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 GLRA3O75311 464 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PET100P0DJ07 73 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 GPC1P35052 558 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 RCVRNP35243 200 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ELK3P41970 407 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ALDH7A1P49419 539 aaKnown RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ECM1Q16610 540 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 HIST2H2ACQ16777 129 aaPredicted RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 HIST2H2AA3Q6FI13 130 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 RASGEF1CQ8N431 466 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 LPAR1Q92633 364 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 MED8Q96G25 268 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 FGFBP2Q9BYJ0 223 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 QPCTLQ9NXS2 382 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 SCN3BQ9NY72 215 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 SPATA31A1Q5TZJ5 1347 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 H2AFYO75367 372 aaKnown RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 NTRK1P04629 796 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 GSTM1P09488 218 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 FCGR1AP12314 374 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PTGER2P43116 358 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PWWP2AQ96N64 755 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ZNF184Q99676 751 aaPredicted RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 A1CFQ9NQ94 594 aaKnown RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 C2CD2Q9Y426 696 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ZSCAN5DPP0CG00 497 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PHKG1Q16816 387 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 TRIM16LQ309B1 348 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 DEFB128Q7Z7B8 93 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 SETD3Q86TU7 594 aaPredicted RBP11.78□□□□□ -0.52
CCBE1-202ENST00000439986 EMC1Q8N766 993 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 TMIEQ8NEW7 156 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 PCDHGA11Q9Y5H2 935 aa11.78□□□□□ -0.52
CCBE1-202ENST00000439986 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.52
CCBE1-202ENST00000439986 USP1O94782 785 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 CLPTM1O96005 669 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 CLEC3BP05452 202 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 FGRP09769 529 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.52
CCBE1-202ENST00000439986 TTC7BQ86TV6 843 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 CCDC71Q8IV32 467 aaPredicted RBP11.77□□□□□ -0.52
CCBE1-202ENST00000439986 P3H2Q8IVL5 708 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 PCYOX1LQ8NBM8 494 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.52
CCBE1-202ENST00000439986 ARL5BQ96KC2 179 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 RPRD1AQ96P16 312 aaPredicted RBP11.77□□□□□ -0.52
CCBE1-202ENST00000439986 LRRC19Q9H756 370 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 UBP1Q9NZI7 540 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 RPS6KB2Q9UBS0 482 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 ACTL7BQ9Y614 415 aa11.77□□□□□ -0.52
CCBE1-202ENST00000439986 NPIPA5A0A0B4J1W7 369 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 M0R3G1 203 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 GSSP48637 474 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 RARRES1P49788 294 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 RPP38P78345 283 aaKnown RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 PDK1Q15118 436 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 IQSEC1Q6DN90 963 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 B3GALNT2Q8NCR0 500 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 AVENQ9NQS1 362 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms