RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MESP2Q0VG99 397 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC6Q16204 474 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF449Q6P9G9 518 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CLEC20AQ6ZU45 233 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CYS1Q717R9 158 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TRPM8Q7Z2W7 1104 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM105Q8N8V8 129 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ZMIZ2Q8NF64 920 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 RAB3IL1Q8TBN0 382 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CSGALNACT1Q8TDX6 532 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 EPS8L3Q8TE67 593 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 USP13Q92995 863 aaPredicted RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM176AQ96HP8 235 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC114Q96M63 670 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SELENOSQ9BQE4 189 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TRIM7Q9C029 511 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SYNCQ9H7C4 482 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 KLC4Q9NSK0 619 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TDP1Q9NUW8 608 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CFAP97Q9P2B7 532 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 STK39Q9UEW8 545 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 MTCL1Q9Y4B5 1905 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM120BA0PK00 339 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CARNS1A5YM72 827 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 C3orf70A6NLC5 250 aaPredicted RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PI4K2BG5E9Z4 385 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TLR5O60602 858 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CSH1P0DML2 217 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CSH2P0DML3 217 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CCNB1P14635 433 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 GLULP15104 373 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TGM2P21980 687 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 LIG3P49916 1009 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TKTL1P51854 596 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 RAD23BP54727 409 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 KDSRQ06136 332 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SRSF5Q13243 272 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SPARCL1Q14515 664 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TAF5Q15542 800 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PARP6Q2NL67 630 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ARMC3Q5W041 872 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 AADACL2Q6P093 401 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 DCUN1D2Q6PH85 259 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TRABD2AQ86V40 505 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PIGZQ86VD9 579 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PSTKQ8IV42 348 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 NUP93Q8N1F7 819 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC33Q8N5R6 958 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 C1orf54Q8WWF1 131 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ATOH1Q92858 354 aaPredicted RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM237Q96Q45 408 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 RBM15Q96T37 977 aaKnown RBP eCLIP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 C1QTNF1Q9BXJ1 281 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 NMUR1Q9HB89 426 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 IL21Q9HBE4 155 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 LRRC4Q9HBW1 653 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 DMAP1Q9NPF5 467 aaPredicted RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SPATA6Q9NWH7 488 aaPredicted RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 OSER1Q9NX31 292 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PSMC3IPQ9P2W1 217 aaPredicted RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 HESX1Q9UBX0 185 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 USTQ9Y2C2 406 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 NUMA1Q14980 2115 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ASXL3Q9C0F0 2248 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 C19orf67A6NJJ6 358 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 GOLGA8SH3BPF8 625 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CHADO15335 359 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 COCHO43405 550 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CILPO75339 1184 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DCTN3O75935 186 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RNF8O76064 485 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 BRAFP15056 766 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 WARSP23381 471 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RPL34P49207 117 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 IFI35P80217 286 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF252P-AS1Q0IIN9 211 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 BNIP1Q12981 228 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 NAB1Q13506 487 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SNCBQ16143 134 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PDK4Q16654 411 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 QPCTQ16769 361 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 P3H1Q32P28 736 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PRSS36Q5K4E3 855 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 WLSQ5T9L3 541 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RNF187Q5TA31 235 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 FAM91A1Q658Y4 838 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ADGRD1Q6QNK2 874 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 GSTA5Q7RTV2 222 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SPATA21Q7Z572 469 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC91Q7Z6B0 441 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ADAT2Q7Z6V5 191 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 UNC93AQ86WB7 457 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 MAP7D3Q8IWC1 876 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 TRIM42Q8IWZ5 723 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms