RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PPFIA2O75334 1257 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 FBXO24O75426 580 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SEC31AO94979 1220 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 IGLV3-25P01717 112 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 APOEP02649 317 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CD48P09326 243 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZDHHC11BP0C7U3 371 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CSH1P0DML2 217 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CSH2P0DML3 217 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MYBL2P10244 700 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ACRP10323 421 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RBP3P10745 1247 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RARGP13631 454 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TFE3P19532 575 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 EN2P19622 333 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ITGB8P26012 769 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 IVDP26440 423 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 KLRC2P26717 231 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ECHS1P30084 290 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ELF1P32519 619 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SERPINB6P35237 376 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PBX3P40426 434 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATP5OP48047 213 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 EPHB3P54753 998 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 EIF3BP55884 814 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TPI1P60174 286 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 DEFB103AP81534 67 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 COG7P83436 770 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 NRG1Q02297 640 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RING1Q06587 406 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF33AQ06730 810 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADCY2Q08462 1091 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 IFRD2Q12894 506 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TAF10Q12962 218 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 GPS1Q13098 491 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 DUSP4Q13115 394 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 DPYSQ14117 519 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 VEPH1Q14D04 833 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PAFAH1B3Q15102 231 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 NOMO1Q15155 1222 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CA9Q16790 459 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 P3H1Q32P28 736 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MGAT5BQ3V5L5 792 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAB6CQ53S08 254 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZC3H12AQ5D1E8 599 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 C10orf120Q5SQS8 335 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 OTUD1Q5VV17 481 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SNX30Q5VWJ9 437 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM117BQ6P1L5 589 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 KLHDC10Q6PID8 442 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 C1orf228Q6PIY5 440 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRSS55Q6UWB4 352 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRIG3Q6UXM1 1119 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RSPO2Q6UXX9 243 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC31Q6UY01 552 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPP1R21Q6ZMI0 780 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RFX8Q6ZV50 586 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRMT10CQ7L0Y3 403 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 C16orf59Q7L2K0 433 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RTL10Q7L3V2 364 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 OTOP2Q7RTS6 562 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 BHLHA9Q7RTU4 235 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TAS1R1Q7RTX1 841 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ANKS1BQ7Z6G8 1248 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCD5Q86SK9 330 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TAC4Q86UU9 113 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ITIH5Q86UX2 942 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HOOK3Q86VS8 718 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TMEM173Q86WV6 379 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDX42Q86XP3 938 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC49Q8IUZ0 686 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HERC6Q8IVU3 1022 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 IQCKQ8N0W5 287 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT222Q8N1A0 295 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 VPS52Q8N1B4 723 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZCCHC9Q8N567 271 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LZTR1Q8N653 840 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PQLC3Q8N755 202 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATAD1Q8NBU5 361 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 STKLD1Q8NE28 680 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 BCL7CQ8WUZ0 217 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HERVK_113Q902F9 699 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 BADQ92934 168 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RTP4Q96DX8 246 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRMT2BQ96GJ1 504 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 B3GALT6Q96L58 329 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MYRFLQ96LU7 910 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PGLYRP2Q96PD5 576 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RUFY1Q96T51 708 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SEPT5Q99719 369 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LBHD1Q9BQE6 289 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CLSTN3Q9BQT9 956 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HERPUD2Q9BSE4 406 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TTLL2Q9BWV7 592 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRIM31Q9BZY9 425 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 BHLHE41Q9C0J9 482 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TKTL2Q9H0I9 626 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAB6CQ9H0N0 254 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PABPC3Q9H361 631 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms