RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ADAM33Q9BZ11 813 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 XPO4Q9C0E2 1151 aaKnown RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 PCED1AQ9H1Q7 454 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 RSPH9Q9H1X1 276 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SGK2Q9HBY8 427 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 ANLNQ9NQW6 1124 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 ZNHIT6Q9NWK9 470 aaKnown RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 MPP6Q9NZW5 540 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 CNOT8Q9UFF9 292 aaKnown RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SUSD2Q9UGT4 822 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SLCO3A1Q9UIG8 710 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SNX10Q9Y5X0 201 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 TCRBV5S1A1TA0A578 114 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 MEI4A8MW99 385 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 TTC34A8MYJ7 566 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 DDX3XO00571 662 aaKnown RBP eCLIP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 CCP110O43303 1012 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 IGLV3-19P01714 112 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 PLEKP08567 350 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 C7P10643 843 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 RHOQP17081 205 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 PSMA2P25787 234 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 L1CAMP32004 1257 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 PTGER3P43115 390 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 CTSOP43234 321 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 RECQLP46063 649 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 MAPKAPK2P49137 400 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 CLCN6P51797 869 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 LIMK1P53667 647 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ATXN3P54252 364 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 RPL7AP62424 266 aaKnown RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 CCDC15Q0P6D6 951 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 SF3A2Q15428 464 aaKnown RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 C9orf64Q5T6V5 341 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 SH3PXD2AQ5TCZ1 1133 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 USP30Q70CQ3 517 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 TMC6Q7Z403 805 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 TFAP2DQ7Z6R9 452 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 DRC7Q8IY82 874 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF683Q8IZ20 524 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 DCAF4L2Q8NA75 395 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ATP11CQ8NB49 1132 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 OR8D1Q8WZ84 308 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 PTPRN2Q92932 1015 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF653Q96CK0 615 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 TBC1D31Q96DN5 1066 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ALG14Q96F25 216 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 HSPA12BQ96MM6 686 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 EPAS1Q99814 870 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 OMDQ99983 421 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ISCUQ9H1K1 167 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 CATSPERBQ9H7T0 1116 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 DLL3Q9NYJ7 618 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 TAS2R14Q9NYV8 317 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 ADAMTS1Q9UHI8 967 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 EVLQ9UI08 416 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-216ENST00000439475 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 HPCAL4Q9UM19 191 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 SLC6A14Q9UN76 642 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 OTOGLQ3ZCN5 2332 aa10.74□□□□□ -0.69
MCF2L-216ENST00000439475 WDFY4Q6ZS81 3184 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 METTL12A8MUP2 240 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 EIF3CLB5ME19 914 aaKnown RBP10.73□□□□□ -0.69
MCF2L-216ENST00000439475 C1QTNF3-AMACRE9PGA6 284 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 I6L893 689 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SLC30A4O14863 429 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 ATP9BO43861 1147 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 ADH1BP00325 375 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 IL1BP01584 269 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SYPP08247 313 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 C5AR1P21730 350 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 ITPKAP23677 461 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 CASP14P31944 242 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SLC8A1P32418 973 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 STK19P49842 368 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-216ENST00000439475 GEMIN4P57678 1058 aaKnown RBP10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SCAPQ12770 1279 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 MAMLD1Q13495 774 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 ELAVL3Q14576 367 aaKnown RBP10.73□□□□□ -0.69
MCF2L-216ENST00000439475 ACAP1Q15027 740 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 DLG2Q15700 870 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 CST6Q15828 149 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 TRIM61Q5EBN2 209 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 DCAF12L1Q5VU92 463 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 DAB2IPQ5VWQ8 1189 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SPECC1LQ69YQ0 1117 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SLC23A3Q6PIS1 610 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 ERMP1Q7Z2K6 904 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 DGLUCYQ7Z3D6 616 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 FAM124AQ86V42 546 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 CACUL1Q86Y37 369 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 MMAAQ8IVH4 418 aaKnown RBP10.73□□□□□ -0.69
MCF2L-216ENST00000439475 SH2D3CQ8N5H7 860 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 RNF214Q8ND24 703 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 OR8K1Q8NGG5 319 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 FNIP1Q8TF40 1166 aa10.73□□□□□ -0.69
MCF2L-216ENST00000439475 RMDN1Q96DB5 314 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms