RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 APBB2Q92870 758 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 FCRL3Q96P31 734 aaPredicted RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 SLC29A1Q99808 456 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 LPIN3Q9BQK8 851 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 SEPT10Q9P0V9 454 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 CPSF3Q9UKF6 684 aaKnown RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 G3V2L1 256 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF26P17031 533 aaPredicted RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 CTBSQ01459 385 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 CBX3Q13185 183 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 C16orf72Q14CZ0 275 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 FERMT1Q9BQL6 677 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 SLC2A11Q9BYW1 496 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 WDR41Q9HAD4 459 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 FAF1Q9UNN5 650 aaPredicted RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 PRSS51A0A1B0GVH4 220 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TMEM233B4DJY2 109 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 ITGB3P05106 788 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 HDCP19113 662 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.2
PCNX3-202ENST00000439247 GLRBP48167 497 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 POTEHQ6S545 545 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 RNF149Q8NC42 400 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 ADCY4Q8NFM4 1077 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 MIPOL1Q8TD10 442 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 PDCD6IPQ8WUM4 868 aaKnown RBP13.83□□□□□ -0.2
PCNX3-202ENST00000439247 FRMD8Q9BZ67 464 aaPredicted RBP13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 DOLKQ9UPQ8 538 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 RGSL1A5PLK6 1076 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TK2O00142 265 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 CXCL11O14625 94 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 OGTO15294 1046 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 CYP2C8P10632 490 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 MYL4P12829 197 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TGM2P21980 687 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 MAGEA8P43361 318 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 SULT2A1Q06520 285 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 KCTD21Q4G0X4 260 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 C1orf127Q8N9H9 656 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 FNDC8Q8TC99 324 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 CLEC4CQ8WTT0 213 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TMEM176AQ96HP8 235 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 PPP1R16BQ96T49 567 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 SUDS3Q9H7L9 328 aaPredicted RBP13.83□□□□□ -0.2
PCNX3-202ENST00000439247 TMPRSS4Q9NRS4 437 aa13.83□□□□□ -0.2
PCNX3-202ENST00000439247 C20orf96Q9NUD7 363 aaPredicted RBP13.83□□□□□ -0.2
PCNX3-202ENST00000439247 GMPR2Q9P2T1 348 aaKnown RBP13.83□□□□□ -0.2
PCNX3-202ENST00000439247 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 RALGDSQ12967 914 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ELMSAN1Q6PJG2 1045 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 CYP2R1Q6VVX0 501 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 CHERPQ8IWX8 916 aaKnown RBP13.82□□□□□ -0.2
PCNX3-202ENST00000439247 AGAP3Q96P47 875 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 CIB1Q99828 191 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 HOXC10Q9NYD6 342 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 PLK2Q9NYY3 685 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ADA2Q9NZK5 511 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 TXNDC16Q9P2K2 825 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 TNNC2P02585 160 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 MX2P20592 715 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ETFBP38117 255 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 PRAMEP78395 509 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 STXBP5Q5T5C0 1151 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
PCNX3-202ENST00000439247 PMF1Q6P1K2 205 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ANKRD23Q86SG2 305 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ACMSDQ8TDX5 336 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 CDKL2Q92772 493 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 SERPINI1Q99574 410 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 TMEM79Q9BSE2 394 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 RRN3Q9NYV6 651 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ZDHHC2Q9UIJ5 367 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 TSPAN16Q9UKR8 245 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 LOC285556D6RIA3 1793 aa13.82□□□□□ -0.2
PCNX3-202ENST00000439247 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PAPSS1O43252 624 aaPredicted RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 GCATO75600 419 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PRKCBP05771 671 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 TPSB2P20231 275 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 ME2P23368 584 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 NAA20P61599 178 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 TPSAB1Q15661 275 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 MTX3Q5HYI7 312 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 FSTL4Q6MZW2 842 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 C16orf89Q6UX73 402 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 LBX2Q6XYB7 198 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 MRPL4Q9BYD3 311 aaKnown RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 TUT1Q9H6E5 874 aaKnown RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 FIS1Q9Y3D6 152 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 MAFBQ9Y5Q3 323 aaPredicted RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 ACOT8O14734 319 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms