RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ECT2Q9H8V3 914 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 KIAA1522Q9P206 1035 aaPredicted RBP21.21■□□□□ 0.99
CHD3-204ENST00000439235 PCYOX1Q9UHG3 505 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 UNC80Q8N2C7 3258 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 MTSS1O43312 755 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 GAS8O95995 478 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 PAPOLAP51003 745 aaKnown RBP21.2■□□□□ 0.98
CHD3-204ENST00000439235 SLC12A1Q13621 1099 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 RUNX3Q13761 415 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 DHX34Q14147 1143 aaKnown RBP21.2■□□□□ 0.98
CHD3-204ENST00000439235 PRKD1Q15139 912 aaPredicted RBP21.2■□□□□ 0.98
CHD3-204ENST00000439235 RNF219Q5W0B1 726 aaPredicted RBP21.2■□□□□ 0.98
CHD3-204ENST00000439235 CCDC70Q6NSX1 233 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 TIGD7Q6NT04 549 aaPredicted RBP21.2■□□□□ 0.98
CHD3-204ENST00000439235 C8orf74Q6P047 294 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 ZNF354CQ86Y25 554 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 TP53INP2Q8IXH6 220 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 CCDC33Q8N5R6 958 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 NETO2Q8NC67 525 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 RSAD2Q8WXG1 361 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 SLCO2A1Q92959 643 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 ARHGEF2Q92974 986 aaKnown RBP21.2■□□□□ 0.98
CHD3-204ENST00000439235 MUC3BQ9H195 1237 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 HPS4Q9NQG7 708 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 IGSF9Q9P2J2 1179 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 DOCK8Q8NF50 2099 aa21.2■□□□□ 0.98
CHD3-204ENST00000439235 CACNG3O60359 315 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 ECEL1O95672 775 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 KCNJ1P48048 391 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 DR1Q01658 176 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 AP1B1Q10567 949 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 SERINC3Q13530 473 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 AAK1Q2M2I8 961 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 HEATR6Q6AI08 1181 aaKnown RBP21.19■□□□□ 0.98
CHD3-204ENST00000439235 GSTA5Q7RTV2 222 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 MAATS1Q7Z4T9 603 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 CCDC13Q8IYE1 715 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 P2RY11Q96G91 374 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 TSGA13Q96PP4 275 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 BRD9Q9H8M2 597 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 SP110Q9HB58 689 aa21.19■□□□□ 0.98
CHD3-204ENST00000439235 DOCK4Q8N1I0 1966 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 EFCAB8A8MWE9 144 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 SGK1O00141 431 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 STK10O94804 968 aaKnown RBP21.18■□□□□ 0.98
CHD3-204ENST00000439235 CCNCP24863 283 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 RBL1P28749 1068 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 STIP1P31948 543 aaKnown RBP21.18■□□□□ 0.98
CHD3-204ENST00000439235 CSKP41240 450 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 FSCBQ5H9T9 825 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 IL31Q6EBC2 164 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 SYDE1Q6ZW31 735 aaPredicted RBP21.18■□□□□ 0.98
CHD3-204ENST00000439235 ALLCQ8N6M5 410 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 NOA1Q8NC60 698 aaKnown RBP21.18■□□□□ 0.98
CHD3-204ENST00000439235 LRRN4CLQ8ND94 238 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 OR7D4Q8NG98 312 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 OR52K2Q8NGK3 314 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 WFDC5Q8TCV5 224 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 LGMNQ99538 433 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 TMEM121Q9BTD3 319 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 RPP25Q9BUL9 199 aaKnown RBP21.18■□□□□ 0.98
CHD3-204ENST00000439235 ATP13A1Q9HD20 1204 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 THEGQ9P2T0 379 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 AMACRQ9UHK6 382 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 IPO11Q9UI26 975 aaKnown RBP21.18■□□□□ 0.98
CHD3-204ENST00000439235 HPCAL4Q9UM19 191 aa21.18■□□□□ 0.98
CHD3-204ENST00000439235 A0A0D9SEW6 157 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 FAM187AA6NFU0 413 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 KCNN4O15554 427 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 MAFKO60675 156 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 ACVRL1P37023 503 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 TFF2Q03403 129 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 TNK2Q07912 1038 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 IL10RBQ08334 325 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 LMAN2Q12907 356 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 ITPRIPL2Q3MIP1 535 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 GLE1Q53GS7 698 aaKnown RBP21.17■□□□□ 0.98
CHD3-204ENST00000439235 TEX35Q5T0J7 233 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 CCDC89Q8N998 374 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 DCAF4L2Q8NA75 395 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 CSGALNACT1Q8TDX6 532 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 NSMCE1Q8WV22 266 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 HTR3CQ8WXA8 447 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 FATE1Q969F0 183 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 SPON2Q9BUD6 331 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 KCNK12Q9HB15 430 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 DNAJC17Q9NVM6 304 aaKnown RBP21.17■□□□□ 0.98
CHD3-204ENST00000439235 LIMD1Q9UGP4 676 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 VPS28Q9UK41 221 aa21.17■□□□□ 0.98
CHD3-204ENST00000439235 PABPC1P11940 636 aaKnown RBP21.16■□□□□ 0.98
CHD3-204ENST00000439235 IL9P15248 144 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 VAV1P15498 845 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 DMC1Q14565 340 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 PPP1R7Q15435 360 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 ARHGAP36Q6ZRI8 547 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.16■□□□□ 0.98
CHD3-204ENST00000439235 FAM71DQ8N9W8 422 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 FEM1AQ9BSK4 669 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 C2orf49Q9BVC5 232 aaPredicted RBP21.16■□□□□ 0.98
CHD3-204ENST00000439235 ACE2Q9BYF1 805 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms