RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ZNF18P17022 549 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 CDH5P33151 784 aaPredicted RBP18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 SCNN1AP37088 669 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 KRT83P78385 493 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 FAM46CQ5VWP2 391 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 LRRC31Q6UY01 552 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 RAB44Q7Z6P3 723 aaPredicted RBP18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 AADATQ8N5Z0 425 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 PNPLA1Q8N8W4 532 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 KDF1Q8NAX2 398 aaPredicted RBP18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 ZCCHC14Q8WYQ9 949 aaKnown RBP18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 SLC6A18Q96N87 628 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 STK33Q9BYT3 514 aa18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 TPX2Q9ULW0 747 aaKnown RBP18.97■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3DA0A087WVF3 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3IA0A087WXS9 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3EA0A087X179 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3KA0A087X1G2 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3FA6NER0 549 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3LB9A6J9 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 C1QTNF3-AMACRE9PGA6 284 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 F8VZ95 297 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 GOLGA8SH3BPF8 625 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 DFNA5O60443 496 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 CBFA2T3O75081 653 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 ADCY5O95622 1261 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 RHOCP08134 193 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3HP0C7X1 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 GABRB2P47870 512 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 CXCR3P49682 368 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 IRAK1P51617 712 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 CCR5P51681 352 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 ADPRHP54922 357 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 INAVAQ3KP66 663 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 SLC25A52Q3SY17 297 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 SLC45A4Q5BKX6 768 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3GQ6DHY5 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3CQ6IPX1 549 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 DPY19L2P1Q6NXN4 242 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 C14orf80Q86SX3 495 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 GLRX5Q86SX6 157 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBC1D3Q8IZP1 549 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 FRS2Q8WU20 508 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 ADAMTS14Q8WXS8 1223 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 CCDC114Q96M63 670 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TBCBQ99426 244 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 C2orf49Q9BVC5 232 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 TMEM121BQ9BXQ6 578 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 ARHGEF38Q9NXL2 777 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 FARP1Q9Y4F1 1045 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 USP24Q9UPU5 2620 aa18.96■□□□□ 0.63
AC004540.1-201ENST00000439120 KCNK3O14649 394 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 VILLO15195 856 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 ATP9BO43861 1147 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 BNIP3LO60238 219 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 TFE3P19532 575 aaPredicted RBP18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 CTSKP43235 329 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 GRK6P43250 576 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 VASPP50552 380 aaPredicted RBP18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 DLG2Q15700 870 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 FKBP15Q5T1M5 1219 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 OTUD1Q5VV17 481 aaPredicted RBP18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 Q6ZVU0 165 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 NOP9Q86U38 636 aaKnown RBP18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 XYLT1Q86Y38 959 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 PGAP3Q96FM1 320 aaPredicted RBP18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 ORAI3Q9BRQ5 295 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 NAA15Q9BXJ9 866 aaKnown RBP18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 VPS16Q9H269 839 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 TBC1D30Q9Y2I9 924 aa18.95■□□□□ 0.62
AC004540.1-201ENST00000439120 TP53BP1Q12888 1972 aaPredicted RBP18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 GOLGA8CPA6NN73 597 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 H0Y8X5 98 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 MMEP08473 750 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 CD38P28907 300 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 IL9RQ01113 521 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 C2CD6Q53TS8 623 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 NAA35Q5VZE5 725 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 SH2D3CQ8N5H7 860 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 ATP11CQ8NB49 1132 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 OR52K2Q8NGK3 314 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 ENOX1Q8TC92 643 aaKnown RBP18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 EPS8L1Q8TE68 723 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 CPA5Q8WXQ8 436 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 NT5C3BQ969T7 300 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 ALG14Q96F25 216 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 SERAC1Q96JX3 654 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 LMBRD1Q9NUN5 540 aa18.94■□□□□ 0.62
AC004540.1-201ENST00000439120 ALOX15BO15296 676 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 SLC7A4O43246 635 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 PCDHGA12O60330 932 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 CNTN5O94779 1100 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 GFPT2O94808 682 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 DRD3P35462 400 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 POM121L1PQ3SYA9 428 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 C5orf22Q49AR2 442 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 ALFQ53S48 1182 aa18.93■□□□□ 0.62
AC004540.1-201ENST00000439120 KCNT1Q5JUK3 1230 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms