RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 AADATQ8N5Z0 425 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 ZSCAN1Q8NBB4 408 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 CYFIP2Q96F07 1278 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 FAM129BQ96TA1 746 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 SDCBP2Q9H190 292 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 PANK4Q9NVE7 773 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 CYTH4Q9UIA0 394 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 FBXO2Q9UK22 296 aaPredicted RBP11.56□□□□□ -0.56
CSTF3-203ENST00000438862 TDRD6O60522 2096 aaKnown RBP11.56□□□□□ -0.56
CSTF3-203ENST00000438862 RELNP78509 3460 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 CCDC187A0A096LP49 1063 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 LY6G6EA0A0G2JKS1 128 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 EDDM13A0A1B0GTR0 161 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 J3QL48 77 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 SCAMP1O15126 338 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 PIAS2O75928 621 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 CLSTN1O94985 981 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 SRPRAP08240 638 aaKnown RBP11.55□□□□□ -0.56
CSTF3-203ENST00000438862 CD70P32970 193 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 ME1P48163 572 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 PSMD8P48556 350 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 TBR1Q16650 682 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 SETMARQ53H47 684 aaPredicted RBP11.55□□□□□ -0.56
CSTF3-203ENST00000438862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.55□□□□□ -0.56
CSTF3-203ENST00000438862 SCARA5Q6ZMJ2 495 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 C14orf80Q86SX3 495 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 TRIM69Q86WT6 500 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 IFT43Q96FT9 208 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 MRGPRX2Q96LB1 330 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 FGFBP2Q9BYJ0 223 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 ADNPQ9H2P0 1102 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 OLA1Q9NTK5 396 aaKnown RBP11.55□□□□□ -0.56
CSTF3-203ENST00000438862 PCDHA7Q9UN72 937 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 HBS1LQ9Y450 684 aaKnown RBP11.55□□□□□ -0.56
CSTF3-203ENST00000438862 PCDHGA7Q9Y5G6 932 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 U3KQA8 63 aa11.55□□□□□ -0.56
CSTF3-203ENST00000438862 FAM237AA0A1B0GTK4 181 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 BLACEA4D250 179 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 GOLGA6L4A6NEF3 574 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 SLC7A4O43246 635 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 NOBOXO60393 691 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 CD46P15529 392 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 CMA1P23946 247 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 MAT2AP31153 395 aaKnown RBP11.54□□□□□ -0.56
CSTF3-203ENST00000438862 SNRPFP62306 86 aaKnown RBP11.54□□□□□ -0.56
CSTF3-203ENST00000438862 BIRC3Q13489 604 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 NCOA4Q13772 614 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 SGSM1Q2NKQ1 1148 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 RRAGBQ5VZM2 374 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 ZCCHC8Q6NZY4 707 aaKnown RBP11.54□□□□□ -0.56
CSTF3-203ENST00000438862 CCDC65Q8IXS2 484 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 XXYLT1Q8NBI6 393 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 FIBINQ8TAL6 211 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 ZNF564Q8TBZ8 553 aaPredicted RBP11.54□□□□□ -0.56
CSTF3-203ENST00000438862 FAM131CQ96AQ9 280 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 MRGPRX3Q96LB0 322 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 DUSP16Q9BY84 665 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 ATP13A2Q9NQ11 1180 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 SEPT10Q9P0V9 454 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 ACSL6Q9UKU0 697 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 COL27A1Q8IZC6 1860 aaPredicted RBP11.54□□□□□ -0.56
CSTF3-203ENST00000438862 KIF26BQ2KJY2 2108 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 UBE4BO95155 1302 aa11.54□□□□□ -0.56
CSTF3-203ENST00000438862 UTP20O75691 2785 aaKnown RBP11.54□□□□□ -0.56
CSTF3-203ENST00000438862 DOCK9Q9BZ29 2069 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 ANKRD17O75179 2603 aaKnown RBP11.53□□□□□ -0.56
CSTF3-203ENST00000438862 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.53□□□□□ -0.56
CSTF3-203ENST00000438862 K7ESM1 405 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 IRAK2O43187 625 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 PLRG1O43660 514 aaKnown RBP11.53□□□□□ -0.56
CSTF3-203ENST00000438862 KIF20AO95235 890 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 IL1BP01584 269 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 SLC5A2P31639 672 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 DRD3P35462 400 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 CSKP41240 450 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 YWHAGP61981 247 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSTF3-203ENST00000438862 UBE2HP62256 183 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 ZNF177Q13360 481 aaPredicted RBP11.53□□□□□ -0.56
CSTF3-203ENST00000438862 MORC3Q14149 939 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 TAF4BQ92750 862 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 ARRDC3Q96B67 414 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 EPSTI1Q96J88 318 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 LMLNQ96KR4 655 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 UBXN6Q9BZV1 441 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 EPN3Q9H201 632 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 HMGXB4Q9UGU5 601 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 ERVW-1Q9UQF0 538 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 ITIH6Q6UXX5 1313 aa11.53□□□□□ -0.56
CSTF3-203ENST00000438862 CPED1A4D0V7 1026 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 EME2A4GXA9 379 aaPredicted RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 TTC34A8MYJ7 566 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 EIF3DO15371 548 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 TBL1XO60907 577 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 RPN1P04843 607 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 LIPCP11150 499 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 SNRPBP14678 240 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms