RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZRANB3Q5FWF4 1079 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 MRNIPQ6NTE8 343 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 VSTM1Q6UX27 236 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TMEM130Q8N3G9 435 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SPPL2BQ8TCT7 592 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TMEM40Q8WWA1 233 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 DNAJC9Q8WXX5 260 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CPT1BQ92523 772 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 MPP6Q9NZW5 540 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CDY1Q9Y6F8 540 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 EME2A4GXA9 379 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 MYADML2A6NDP7 307 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 B2RBV5 119 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SUPT3HO75486 399 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ABHD2P08910 425 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CCNB1P14635 433 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TCN1P20061 433 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PROZP22891 400 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TAF10Q12962 218 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CYP4X1Q8N118 509 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PDZD8Q8NEN9 1154 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SLC35F5Q8WV83 523 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PRRC2BQ5JSZ5 2229 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TM9SF1O15321 606 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 MFSD11O43934 449 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 EOMESO95936 686 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 KLRC2P26717 231 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SERPINB8P50452 374 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF132P52740 706 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TRIM32Q13049 653 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CST9Q5W186 159 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CLEC20AQ6ZU45 233 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ITIH5Q86UX2 942 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 TRIML2Q8N7C3 387 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SRPK1Q96SB4 655 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ACSS3Q9H6R3 686 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ARHGEF4Q9NR80 690 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 GDAP2Q9NXN4 497 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 DCDC2Q9UHG0 476 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 A0A1W2PQH9 124 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ERI2A8K979 691 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 F8W8V4 182 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PAGE1O75459 146 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CBX6O95503 412 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ERVK-10P10266 1014 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ATP6V1B1P15313 513 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 BGNP21810 368 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 ADRA1DP25100 572 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 NPY2RP49146 381 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 HECTD3Q5T447 861 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 KRT80Q6KB66 452 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PTAR1Q7Z6K3 402 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 SCLYQ96I15 445 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 VRTNQ9H8Y1 702 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 FLRT1Q9NZU1 646 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PKP3Q9Y446 797 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 C2orf81A6NN90 581 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 GPR32O75388 356 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 STMN1P16949 149 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ABCG1P45844 678 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 RCN1Q15293 331 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 FAM83EQ2M2I3 478 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 HABP4Q5JVS0 413 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 BRMS1LQ5PSV4 323 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 VARS2Q5ST30 1063 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 MORN1Q5T089 497 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 RCOR3Q9P2K3 495 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 AFF4Q9UHB7 1163 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 GON4LQ3T8J9 2241 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 KIF3CO14782 793 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 NVLO15381 856 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 RHOAP61586 193 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ST8SIA6P61647 398 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 SYPL2Q5VXT5 272 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ANKRD22Q5VYY1 191 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 DDX53Q86TM3 631 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 SCAMP5Q8TAC9 235 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 CD101Q93033 1021 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ULK4Q96C45 1275 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 MRPL17Q9NRX2 175 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 MTO1Q9Y2Z2 717 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ACOT9Q9Y305 439 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 TCRBV9S1A1TA0A576 114 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms