RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TFAP2DQ7Z6R9 452 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 DEFB119Q8N690 84 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 OR52K2Q8NGK3 314 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 TRIM11Q96F44 468 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF419Q96HQ0 510 aaPredicted RBP25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 HSPA12BQ96MM6 686 aa25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.4■■□□□ 1.66
RAPGEF1-206ENST00000438647 DDX3XO00571 662 aaKnown RBP eCLIP25.39■■□□□ 1.665e-15■■■■□ 19.6
RAPGEF1-206ENST00000438647 CCP110O43303 1012 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 RTN2O75298 545 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 FTLP02792 175 aaPredicted RBP25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 SKILP12757 684 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 ITPKAP23677 461 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 MAMLD1Q13495 774 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 NFKBIBQ15653 356 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 RAB6CQ53S08 254 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 C9orf64Q5T6V5 341 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 PEAR1Q5VY43 1037 aaPredicted RBP25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 CADM4Q8NFZ8 388 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 RTKNQ9BST9 563 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 GPR174Q9BXC1 333 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 XPO4Q9C0E2 1151 aaKnown RBP25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 RAB6CQ9H0N0 254 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 MTG2Q9H4K7 406 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 EVLQ9UI08 416 aaPredicted RBP25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 PILRBQ9UKJ0 227 aa25.39■■□□□ 1.66
RAPGEF1-206ENST00000438647 ILVBLA1L0T0 632 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 SERPING1P05155 500 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 NUMBP49757 651 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 LIMK1P53667 647 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 AIF1P55008 147 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 SCAPQ12770 1279 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 WDR45BQ5MNZ6 344 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 TCEAL6Q6IPX3 200 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 PLEKHA7Q6IQ23 1121 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 SLFN11Q7Z7L1 901 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 SLC41A1Q8IVJ1 513 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 CCDC185Q8N715 623 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 DCAF4L2Q8NA75 395 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 CEP76Q8TAP6 659 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 CPLX3Q8WVH0 158 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 TCEAL3Q969E4 200 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 PCED1AQ9H1Q7 454 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 GON4LQ3T8J9 2241 aa25.38■■□□□ 1.65
RAPGEF1-206ENST00000438647 GDF9O60383 454 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 MYBL1P10243 752 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 ELAVL3Q14576 367 aaKnown RBP25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 EFHC2Q5JST6 749 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 MANEALQ5VSG8 457 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 SCYL2Q6P3W7 929 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 USP30Q70CQ3 517 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 RGL4Q8IZJ4 473 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 PTPRN2Q92932 1015 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 NUSAP1Q9BXS6 441 aaKnown RBP25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 TMEM74BQ9NUR3 256 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 NCKAP1Q9Y2A7 1128 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 SCINQ9Y6U3 715 aa25.37■■□□□ 1.65
RAPGEF1-206ENST00000438647 DNAH14Q0VDD8 3507 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 MEI4A8MW99 385 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 SLC30A4O14863 429 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 ATP9BO43861 1147 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 GYPCP04921 128 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 PLEKP08567 350 aaPredicted RBP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 CST6Q15828 149 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 ACCSLQ4AC99 568 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 TRIM61Q5EBN2 209 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 ARTNQ5T4W7 220 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 HGSNATQ68CP4 663 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 RWDD4Q6NW29 188 aaKnown RBP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 TMC6Q7Z403 805 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 FAM124AQ86V42 546 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 ZNF653Q96CK0 615 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 TBC1D31Q96DN5 1066 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 EDEM2Q9BV94 578 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 BTBD1Q9H0C5 482 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 PABPC3Q9H361 631 aaKnown RBP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 MRPL47Q9HD33 250 aaKnown RBP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 ZNF212Q9UDV6 495 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 CNOT8Q9UFF9 292 aaKnown RBP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 SUSD2Q9UGT4 822 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 HS3ST2Q9Y278 367 aa25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 ATXN2Q99700 1313 aaKnown RBP25.36■■□□□ 1.65
RAPGEF1-206ENST00000438647 CEP192Q8TEP8 1941 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 TNRC6BQ9UPQ9 1833 aaKnown RBP25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 DOCK4Q8N1I0 1966 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 LAMA1P25391 3075 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 LNP1A1A4G5 178 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 ATMINO43313 823 aaPredicted RBP25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 LRIG2O94898 1065 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 ADH1BP00325 375 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 RHOQP17081 205 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 PSMA2P25787 234 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 ETFBP38117 255 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 MAPKAPK2P49137 400 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 DUOXA1Q1HG43 343 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 SLC23A3Q6PIS1 610 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 DSG4Q86SJ6 1040 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 MMAAQ8IVH4 418 aaKnown RBP25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 SH2D3CQ8N5H7 860 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms