RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 XPO6Q96QU8 1125 aaKnown RBP13.75□□□□□ -0.21
RPE-208ENST00000436630 KRT12Q99456 494 aa13.75□□□□□ -0.21
RPE-208ENST00000436630 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
RPE-208ENST00000436630 TRMT61BQ9BVS5 477 aaKnown RBP13.75□□□□□ -0.21
RPE-208ENST00000436630 KIAA1522Q9P206 1035 aaPredicted RBP13.75□□□□□ -0.21
RPE-208ENST00000436630 IGSF9Q9P2J2 1179 aa13.75□□□□□ -0.21
RPE-208ENST00000436630 SAE1Q9UBE0 346 aaPredicted RBP13.75□□□□□ -0.21
RPE-208ENST00000436630 HPCAL4Q9UM19 191 aa13.75□□□□□ -0.21
RPE-208ENST00000436630 MFHAS1Q9Y4C4 1052 aa13.75□□□□□ -0.21
RPE-208ENST00000436630 NUMBLQ9Y6R0 609 aa13.75□□□□□ -0.21
RPE-208ENST00000436630 NEDD8-MDP1E9PL57 170 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 DFFAO00273 331 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 NDC80O14777 642 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 TYRP14679 529 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 CCNCP24863 283 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 ACTN2P35609 894 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 GEMIN4P57678 1058 aaKnown RBP13.74□□□□□ -0.21
RPE-208ENST00000436630 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
RPE-208ENST00000436630 SNX1Q13596 522 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 TTC27Q6P3X3 843 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 PARM1Q6UWI2 310 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 C4orf22Q6V702 233 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
RPE-208ENST00000436630 TMEM25Q86YD3 366 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 CCDC13Q8IYE1 715 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 ALLCQ8N6M5 410 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 DCAF4L2Q8NA75 395 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 NSMCE1Q8WV22 266 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 RSAD2Q8WXG1 361 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 FGF14Q92915 247 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 ARHGEF2Q92974 986 aaKnown RBP13.74□□□□□ -0.21
RPE-208ENST00000436630 CELF6Q96J87 481 aaKnown RBP13.74□□□□□ -0.21
RPE-208ENST00000436630 ZNF599Q96NL3 588 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 VAT1Q99536 393 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 SLC39A8Q9C0K1 460 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 RAB17Q9H0T7 212 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 NOL6Q9H6R4 1146 aaKnown RBP13.74□□□□□ -0.21
RPE-208ENST00000436630 SP110Q9HB58 689 aa13.74□□□□□ -0.21
RPE-208ENST00000436630 COL6A3P12111 3177 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 C2CD4DB7Z1M9 353 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 SGK1O00141 431 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 GDI1P31150 447 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 EIF2DP41214 584 aaKnown RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 PAPOLAP51003 745 aaKnown RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 IL10RBQ08334 325 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 AP1B1Q10567 949 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 SERINC3Q13530 473 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 P3H1Q32P28 736 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 RHBDF2Q6PJF5 856 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 METTL3Q86U44 580 aaKnown RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPE-208ENST00000436630 CCDC89Q8N998 374 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 NOA1Q8NC60 698 aaKnown RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 CCNYQ8ND76 341 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 WFIKKN2Q8TEU8 576 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 HTR3CQ8WXA8 447 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 EXOC4Q96A65 974 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 ASIC4Q96FT7 647 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 HMCESQ96FZ2 354 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 PPP1R2P1Q96PQ5 205 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 FAM118BQ9BPY3 351 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 ACE2Q9BYF1 805 aaPredicted RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 LINC00597Q9H2U6 94 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 ECT2Q9H8V3 914 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 PCDH9Q9HC56 1237 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 TRPV5Q9NQA5 729 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 NDFIP2Q9NV92 336 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 PRKAG3Q9UGI9 489 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 AMACRQ9UHK6 382 aa13.73□□□□□ -0.21
RPE-208ENST00000436630 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
RPE-208ENST00000436630 TICRRQ7Z2Z1 1910 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 KCNN4O15554 427 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 KDELR3O43731 214 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 PRAMEF11O60813 436 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 OPHN1O60890 802 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 ARSAP15289 507 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 PLK1P53350 603 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 IFI35P80217 286 aaPredicted RBP13.72□□□□□ -0.21
RPE-208ENST00000436630 SULT2A1Q06520 285 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 RUNX3Q13761 415 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 PTK6Q13882 451 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 GRM2Q14416 872 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 E2F5Q15329 346 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 ITPRIPL2Q3MIP1 535 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 RNF219Q5W0B1 726 aaPredicted RBP13.72□□□□□ -0.21
RPE-208ENST00000436630 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 JAMLQ86YT9 394 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 AHI1Q8N157 1196 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 BBS5Q8N3I7 341 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 UBXN4Q92575 508 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 DNASE1L2Q92874 299 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms