RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TTC34A8MYJ7 566 aa8□□□□□ -1.13
VPS50-203ENST00000436177 C1QTNF3-AMACRE9PGA6 284 aa8□□□□□ -1.13
VPS50-203ENST00000436177 RNF225M0QZC1 329 aaPredicted RBP8□□□□□ -1.13
VPS50-203ENST00000436177 MAGEC1O60732 1142 aa8□□□□□ -1.13
VPS50-203ENST00000436177 HSF2BPO75031 334 aa8□□□□□ -1.13
VPS50-203ENST00000436177 CALCAP01258 141 aa8□□□□□ -1.13
VPS50-203ENST00000436177 IGHV4-34P06331 123 aa8□□□□□ -1.13
VPS50-203ENST00000436177 PDGFRAP16234 1089 aa8□□□□□ -1.13
VPS50-203ENST00000436177 ZNF18P17022 549 aa8□□□□□ -1.13
VPS50-203ENST00000436177 GOT1P17174 413 aa8□□□□□ -1.13
VPS50-203ENST00000436177 C5AR1P21730 350 aa8□□□□□ -1.13
VPS50-203ENST00000436177 CCR1P32246 355 aa8□□□□□ -1.13
VPS50-203ENST00000436177 NUDT1P36639 197 aa8□□□□□ -1.13
VPS50-203ENST00000436177 CTSKP43235 329 aa8□□□□□ -1.13
VPS50-203ENST00000436177 GPD2P43304 727 aa8□□□□□ -1.13
VPS50-203ENST00000436177 CCR5P51681 352 aa8□□□□□ -1.13
VPS50-203ENST00000436177 GALCP54803 685 aa8□□□□□ -1.13
VPS50-203ENST00000436177 PDCLQ13371 301 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SLC12A1Q13621 1099 aa8□□□□□ -1.13
VPS50-203ENST00000436177 ARID5BQ14865 1188 aa8□□□□□ -1.13
VPS50-203ENST00000436177 TPD52L1Q16890 204 aaPredicted RBP8□□□□□ -1.13
VPS50-203ENST00000436177 ACCSLQ4AC99 568 aa8□□□□□ -1.13
VPS50-203ENST00000436177 HS1BP3Q53T59 392 aa8□□□□□ -1.13
VPS50-203ENST00000436177 C19orf48Q6RUI8 117 aa8□□□□□ -1.13
VPS50-203ENST00000436177 MMS22LQ6ZRQ5 1243 aa8□□□□□ -1.13
VPS50-203ENST00000436177 TMPRSS7Q7RTY8 843 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SLCO6A1Q86UG4 719 aa8□□□□□ -1.13
VPS50-203ENST00000436177 TRIM59Q8IWR1 403 aa8□□□□□ -1.13
VPS50-203ENST00000436177 ELOA2Q8IYF1 753 aaPredicted RBP8□□□□□ -1.13
VPS50-203ENST00000436177 CCAR2Q8N163 923 aaKnown RBP8□□□□□ -1.13
VPS50-203ENST00000436177 STK40Q8N2I9 435 aa8□□□□□ -1.13
VPS50-203ENST00000436177 OXR1Q8N573 874 aa8□□□□□ -1.13
VPS50-203ENST00000436177 MDM1Q8TC05 714 aa8□□□□□ -1.13
VPS50-203ENST00000436177 OR8D1Q8WZ84 308 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SLC39A13Q96H72 371 aa8□□□□□ -1.13
VPS50-203ENST00000436177 RPL10LQ96L21 214 aaKnown RBP8□□□□□ -1.13
VPS50-203ENST00000436177 CCDC114Q96M63 670 aa8□□□□□ -1.13
VPS50-203ENST00000436177 KREMEN1Q96MU8 473 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SPAG5Q96R06 1193 aa8□□□□□ -1.13
VPS50-203ENST00000436177 ELF4Q99607 663 aaPredicted RBP8□□□□□ -1.13
VPS50-203ENST00000436177 ZSWIM1Q9BR11 485 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SRRTQ9BXP5 876 aaKnown RBP8□□□□□ -1.13
VPS50-203ENST00000436177 NEUROG2Q9H2A3 272 aa8□□□□□ -1.13
VPS50-203ENST00000436177 PDCL3Q9H2J4 239 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8□□□□□ -1.13
VPS50-203ENST00000436177 VPS28Q9UK41 221 aa8□□□□□ -1.13
VPS50-203ENST00000436177 PAXBP1Q9Y5B6 917 aa8□□□□□ -1.13
VPS50-203ENST00000436177 SLCO1B1Q9Y6L6 691 aa8□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3DA0A087WVF3 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3IA0A087WXS9 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3EA0A087X179 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3KA0A087X1G2 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3FA6NER0 549 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 KCNU1A8MYU2 1149 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3LB9A6J9 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 KCNK3O14649 394 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 PAPSS1O43252 624 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 BNIP3LO60238 219 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 DXOO77932 396 aaKnown RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 GLI1P08151 1106 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3HP0C7X1 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 CDK4P11802 303 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 MZF1P28698 734 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 CD38P28907 300 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 KRT9P35527 623 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 STK19P49842 368 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 ADPRHP54922 357 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 GUCA2AQ02747 115 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 PTK2Q05397 1052 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 CCDC15Q0P6D6 951 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 NME3Q13232 169 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 ZNF177Q13360 481 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 COL9A2Q14055 689 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 MORC3Q14149 939 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 ACAP1Q15027 740 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 ARHGAP44Q17R89 818 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 FSCBQ5H9T9 825 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 EFHC1Q5JVL4 640 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 C9orf64Q5T6V5 341 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 SYPL2Q5VXT5 272 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3GQ6DHY5 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3CQ6IPX1 549 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 NAPEPLDQ6IQ20 393 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 DHRS13Q6UX07 377 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 GBP6Q6ZN66 633 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 PRPF39Q86UA1 669 aaKnown RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 CIR1Q86X95 450 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 GATAD2AQ86YP4 633 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 PASD1Q8IV76 773 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 TBC1D3Q8IZP1 549 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 LMO3Q8TAP4 145 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 BAHD1Q8TBE0 780 aaPredicted RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 NXPE2Q96DL1 559 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 PPP1R13BQ96KQ4 1090 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 MRGPRX3Q96LB0 322 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 CRACR2AQ9BSW2 395 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 MUC3BQ9H195 1237 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms