RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TBC1D3LB9A6J9 549 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 PJA2O43164 708 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 TBC1D3HP0C7X1 549 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 GRK2P25098 689 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 TAF10Q12962 218 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 SHROOM1Q2M3G4 852 aaPredicted RBP15.89■□□□□ 0.14
NEDD4-202ENST00000435532 TBC1D3GQ6DHY5 549 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 TBC1D3CQ6IPX1 549 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 IFNEQ86WN2 208 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 PHF13Q86YI8 300 aaPredicted RBP15.89■□□□□ 0.14
NEDD4-202ENST00000435532 TBC1D3Q8IZP1 549 aaPredicted RBP15.89■□□□□ 0.14
NEDD4-202ENST00000435532 CLYBLQ8N0X4 340 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 MYCBPAPQ8TBZ2 947 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 LENG1Q96BZ8 264 aaPredicted RBP15.89■□□□□ 0.14
NEDD4-202ENST00000435532 PPP1R10Q96QC0 940 aaKnown RBP15.89■□□□□ 0.14
NEDD4-202ENST00000435532 SLC27A6Q9Y2P4 619 aa15.89■□□□□ 0.14
NEDD4-202ENST00000435532 USP15Q9Y4E8 981 aaPredicted RBP15.89■□□□□ 0.14
NEDD4-202ENST00000435532 URADA6NGE7 173 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 A8MX80 341 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 CASP5P51878 434 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 MFSD7Q6UXD7 560 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 IL22Q9GZX6 179 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 KCNF1Q9H3M0 494 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 ASB8Q9H765 288 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 CYP4F12Q9HCS2 524 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 COL1A1P02452 1464 aaPredicted RBP15.89■□□□□ 0.13
NEDD4-202ENST00000435532 A0A1W2PQH9 124 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 KCNK1O00180 336 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 CLDN5O00501 218 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 DNALI1O14645 258 aaPredicted RBP15.89■□□□□ 0.13
NEDD4-202ENST00000435532 AIM2O14862 343 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 GCATO75600 419 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 RFX8Q6ZV50 586 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 DACH2Q96NX9 599 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 ACBD6Q9BR61 282 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 AGO1Q9UL18 857 aaKnown RBP15.89■□□□□ 0.13
NEDD4-202ENST00000435532 FMO4P31512 558 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 ELP6Q0PNE2 266 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 GNA13Q14344 377 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 CCL14Q16627 93 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 FOXR2Q6PJQ5 311 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 TMEM175Q9BSA9 504 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 ADAMTSL3P82987 1691 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 IGKV6D-41A0A0C4DH26 115 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 AKAP10O43572 662 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 TLX1P31314 330 aaPredicted RBP15.89■□□□□ 0.13
NEDD4-202ENST00000435532 MAMLD1Q13495 774 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 MARK2Q7KZI7 788 aaKnown RBP15.89■□□□□ 0.13
NEDD4-202ENST00000435532 COLGALT2Q8IYK4 626 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 FAM71AQ8IYT1 594 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 CLEC4FQ8N1N0 589 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 EPS8L1Q8TE68 723 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 DNAJC1Q96KC8 554 aaKnown RBP15.89■□□□□ 0.13
NEDD4-202ENST00000435532 ZFP14Q9HCL3 533 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 ADAM21Q9UKJ8 722 aa15.89■□□□□ 0.13
NEDD4-202ENST00000435532 TRDMT1O14717 391 aaKnown RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 SKAP2O75563 359 aaPredicted RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CPSF4O95639 269 aaKnown RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 MBTD1Q05BQ5 628 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 DBF4BQ8NFT6 615 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CASKIN2Q8WXE0 1202 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 DTNBP1Q96EV8 351 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 ASB2Q96Q27 587 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 ZNF670Q9BS34 389 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 ASB3Q9Y575 518 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 A0A0A0MRY4 1105 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 DDX3XO00571 662 aaKnown RBP eCLIP15.88■□□□□ 0.131e-7■□□□□ 11
NEDD4-202ENST00000435532 CYP1A2P05177 515 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CCNB1P14635 433 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CPA3P15088 417 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 RRM2P31350 389 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 ALDH9A1P49189 494 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CDK16Q00536 496 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 GAD2Q05329 585 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CHMP1BQ7LBR1 199 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 KREMEN2Q8NCW0 462 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 SPATA13Q96N96 652 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CCNDBP1O95273 360 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 VAPBO95292 243 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 TRPC1P48995 793 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 C15orf59Q2T9L4 293 aaPredicted RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 TPGS2Q68CL5 300 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 SEL1L3Q68CR1 1132 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 PRR23CQ6ZRP0 262 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 SHDQ96IW2 340 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 SOX13Q9UN79 622 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 TNPO3Q9Y5L0 923 aaKnown RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 ANKDD1BA6NHY2 528 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 PPP1R11O60927 126 aaPredicted RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 HTR7P34969 479 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 TTPAP49638 278 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 CYLC2Q14093 348 aaPredicted RBP15.88■□□□□ 0.13
NEDD4-202ENST00000435532 FAM124AQ86V42 546 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 NAT16Q8N8M0 369 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 SNX27Q96L92 541 aa15.88■□□□□ 0.13
NEDD4-202ENST00000435532 BBS4Q96RK4 519 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms