RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 HTR7P34969 479 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 MLH1P40692 756 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 DAOAP59103 153 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 CDC16Q13042 620 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 MPP3Q13368 585 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 HERC3Q15034 1050 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 IZUMO2Q6UXV1 221 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 PAQR9Q6ZVX9 377 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 OR52K1Q8NGK4 314 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 URGCPQ8TCY9 931 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 UCMAQ8WVF2 138 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 IRGQQ8WZA9 623 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 TSC22D3Q99576 134 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 OSMRQ99650 979 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 GPR22Q99680 433 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 MRM3Q9HC36 420 aaKnown RBP13.95□□□□□ -0.18
COL6A3-207ENST00000433762 OXSMQ9NWU1 459 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 SEPT10Q9P0V9 454 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 VTI1BQ9UEU0 232 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 BCAP29Q9UHQ4 241 aa13.95□□□□□ -0.18
COL6A3-207ENST00000433762 A0A096LPK6 155 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 HCRTO43612 131 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CREB3O43889 395 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 SKAP2O75563 359 aaPredicted RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 COX4I1P13073 169 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ARRB2P32121 409 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 LHX1P48742 406 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CCNHP51946 323 aaPredicted RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 MTTPP55157 894 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ASPHQ12797 758 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 UGP2Q16851 508 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ANO4Q32M45 955 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CFAP157Q5JU67 520 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 BEND5Q7L4P6 421 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 FBXW8Q8N3Y1 598 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 PTCD2Q8WV60 388 aaKnown RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 DPF3Q92784 378 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 BTBD9Q96Q07 612 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 EPAS1Q99814 870 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 TINF2Q9BSI4 451 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 TRIM62Q9BVG3 475 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 NMRAL1Q9HBL8 299 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 SLC38A7Q9NVC3 462 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 SLC17A6Q9P2U8 582 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 PPM1HQ9ULR3 514 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 PIN4Q9Y237 131 aaKnown RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 RAP2CQ9Y3L5 183 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 HES2Q9Y543 173 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CABYRO75952 493 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 HSPA4LO95757 839 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 THRAP10827 490 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ITGAXP20702 1163 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 GJA5P36382 358 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 TKTL1P51854 596 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 SLC25A3Q00325 362 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CDH17Q12864 832 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 SH2D4BQ5SQS7 431 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ZYG11AQ6WRX3 759 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 KCNMB4Q86W47 210 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 PDSS2Q86YH6 399 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CNTN4Q8IWV2 1026 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 CPSF7Q8N684 471 aaKnown RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 PDCD6IPQ8WUM4 868 aaKnown RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 KIFC1Q9BW19 673 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 DRC3Q9H069 523 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 ILKAPQ9H0C8 392 aaPredicted RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
COL6A3-207ENST00000433762 COG4Q9H9E3 785 aa13.94□□□□□ -0.18
COL6A3-207ENST00000433762 HAS3O00219 553 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 FYNP06241 537 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 LYNP07948 512 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 CRYBB1P53674 252 aaPredicted RBP13.93□□□□□ -0.18
COL6A3-207ENST00000433762 SOX4Q06945 474 aaPredicted RBP13.93□□□□□ -0.18
COL6A3-207ENST00000433762 KLF10Q13118 480 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 PPM1JQ5JR12 505 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 ZNF618Q5T7W0 954 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 ANKRD23Q86SG2 305 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
COL6A3-207ENST00000433762 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 TEKT5Q96M29 485 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
COL6A3-207ENST00000433762 SERPINI1Q99574 410 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 RHOJQ9H4E5 214 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 CDHR5Q9HBB8 845 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 PATJQ8NI35 1801 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 GOLGA8QA0A0J9YX86 632 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 GOLGA8OA6NCC3 632 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 GOLGA8NF8WBI6 632 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 MATN2O00339 956 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 C2P06681 752 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 SRGAP2BP0DMP2 458 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 AKAP5P24588 427 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 SERPINB5P36952 375 aa13.93□□□□□ -0.18
COL6A3-207ENST00000433762 CXCR3P49682 368 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms