RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CRHR1P34998 444 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 RPL22P35268 128 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 FDFT1P37268 417 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 QARSP47897 775 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 MRPS5P82675 430 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 PDE1BQ01064 536 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 CYLC2Q14093 348 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 LGSNQ5TDP6 509 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 HEATR6Q6AI08 1181 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 CDHR3Q6ZTQ4 885 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 SPATA31D4Q6ZUB0 917 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 BTN2A1Q7KYR7 527 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 ARPINQ7Z6K5 226 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 PRPF39Q86UA1 669 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 CRLF3Q8IUI8 442 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 SLITRK4Q8IW52 837 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 PALM2Q8IXS6 379 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 NUP93Q8N1F7 819 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 GAB3Q8WWW8 586 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 EDEM1Q92611 657 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 NKD1Q969G9 470 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 RTP4Q96DX8 246 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 SGCZQ96LD1 299 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 ZDHHC15Q96MV8 337 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 RMDN3Q96TC7 470 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 TTC1Q99614 292 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 FAM118BQ9BPY3 351 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 C11orf70Q9BRQ4 267 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 TMEM121Q9BTD3 319 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 SENP6Q9GZR1 1112 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 TNKS2Q9H2K2 1166 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 Q9H521 79 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 TDRD3Q9H7E2 651 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 NRDE2Q9H7Z3 1164 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 ETNK2Q9NVF9 386 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 FNIP2Q9P278 1114 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 THEGQ9P2T0 379 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 CPA4Q9UI42 421 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 ADAMTS6Q9UKP5 1117 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 CNOT11Q9UKZ1 510 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 BLOC1S6Q9UL45 172 aa8.25□□□□□ -1.09
VTI1A-202ENST00000432306 MRPL11Q9Y3B7 192 aaKnown RBP8.25□□□□□ -1.09
VTI1A-202ENST00000432306 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.091e-7■■■■■ 172.3
VTI1A-202ENST00000432306 A0A0J9YVX5 310 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ARHGAP10A1A4S6 786 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 PRR5-ARHGAP8B1AHC4 643 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 TCP10L2B9ZVM9 353 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 APOC4-APOC2K7ER74 178 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 APOC2P02655 101 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CYP11A1P05108 521 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 BPGMP07738 259 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 KRT5P13647 590 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CCDC130P13994 396 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CNTFP26441 200 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 HSPA13P48723 471 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ACADVLP49748 655 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 NUMBP49757 651 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 HSD17B4P51659 736 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 AQP4P55087 323 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 MTTPP55157 894 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 FCGRTP55899 365 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ARHGAP8P85298 464 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 DLG1Q12959 904 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CUL2Q13617 745 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 KCNJ11Q14654 390 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 PPP2R5DQ14738 602 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 KBTBD12Q3ZCT8 623 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 USH1GQ495M9 461 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 MMEL1Q495T6 779 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CFAP157Q5JU67 520 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ANO5Q75V66 913 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 MIER3Q7Z3K6 550 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 SATL1Q86VE3 508 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ARID3BQ8IVW6 561 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-202ENST00000432306 GSTCDQ8NEC7 633 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 RDM1Q8NG50 284 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ACTL9Q8TC94 416 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ACMSDQ8TDX5 336 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 TRPC4APQ8TEL6 797 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 BHMTQ93088 406 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 HAUS1Q96CS2 278 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 AGAP3Q96P47 875 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 MOGAT1Q96PD6 335 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 WRNIP1Q96S55 665 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 BARD1Q99728 777 aaKnown RBP8.24□□□□□ -1.09
VTI1A-202ENST00000432306 COL25A1Q9BXS0 654 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-202ENST00000432306 TMEM39BQ9GZU3 492 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 PDZD7Q9H5P4 517 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF358Q9NW07 568 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 DNAJC28Q9NX36 388 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CDH22Q9UJ99 828 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 PSMD13Q9UNM6 376 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 CRYL1Q9Y2S2 319 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 COL6A3P12111 3177 aa8.24□□□□□ -1.09
VTI1A-202ENST00000432306 H0YCG3 227 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 INO80B-WBP1J3KQ70 363 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 SGK1O00141 431 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 DNAJA2O60884 412 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms