RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 TBC1D3DA0A087WVF3 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3IA0A087WXS9 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3EA0A087X179 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3KA0A087X1G2 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3BA6NDS4 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3FA6NER0 549 aaPredicted RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 NPIPB15A6NHN6 443 aaPredicted RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 AHRRA9YTQ3 701 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3LB9A6J9 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TNFSF14O43557 240 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 IGHDP01880 384 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 CFIP05156 583 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3HP0C7X1 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 ATP6V1B1P15313 513 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 IL11P20809 199 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 PRKCHP24723 683 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 MCM7P33993 719 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 ARL1P40616 181 aaPredicted RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 HARS2P49590 506 aaKnown RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 RARSP54136 660 aaKnown RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 ABHD18Q0P651 414 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 CYP2A13Q16696 494 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 DUSP28Q4G0W2 176 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 PREPLQ4J6C6 727 aaPredicted RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 CCDC158Q5M9N0 1113 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3GQ6DHY5 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3CQ6IPX1 549 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 C16orf89Q6UX73 402 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 RTL10Q7L3V2 364 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 GALNTL5Q7Z4T8 443 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 UBE2Q1Q7Z7E8 422 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 IQCA1Q86XH1 822 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 BRSK2Q8IWQ3 736 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 CCDC105Q8IYK2 499 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 CEP57L1Q8IYX8 460 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TBC1D3Q8IZP1 549 aaPredicted RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 RFWD2Q8NHY2 731 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 SOCS4Q8WXH5 440 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 CTHRC1Q96CG8 243 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 WDYHV1Q96HA8 205 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 HIC2Q96JB3 615 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 RANBP17Q9H2T7 1088 aaKnown RBP5.9□□□□□ -1.46
LINC00348-201ENST00000428761 ABCF3Q9NUQ8 709 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 TMEM74BQ9NUR3 256 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 SLC12A4Q9UP95 1085 aa5.9□□□□□ -1.46
LINC00348-201ENST00000428761 PHLPP1O60346 1717 aa5.9□□□□□ -1.47
LINC00348-201ENST00000428761 SUPT6HQ7KZ85 1726 aaKnown RBP5.9□□□□□ -1.47
LINC00348-201ENST00000428761 KDM5DQ9BY66 1539 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CCDC187A0A096LP49 1063 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CHL1O00533 1208 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 PPM1DO15297 605 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TGFB1I1O43294 461 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 RPS6KA4O75676 772 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TSPAN9O75954 239 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CCNDBP1O95273 360 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 PGM3O95394 542 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 VNN1O95497 513 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 ERBB2P04626 1255 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CSH1P0DML2 217 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CSH2P0DML3 217 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 NR2F1P10589 423 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 ALADP13716 330 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 GATA3P23771 443 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 ZFP36P26651 326 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 GRK5P34947 590 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TNNT3P45378 269 aaPredicted RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CDH15P55291 814 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 NLRP5P59047 1200 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CXADRP78310 365 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 IFI35P80217 286 aaPredicted RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 MC1RQ01726 317 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 RNASELQ05823 741 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 BFSP2Q13515 415 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 DCTN2Q13561 401 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 FAM187BQ17R55 369 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 ACSM6Q6P461 480 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TTC39CQ8N584 583 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 SLC25A43Q8WUT9 341 aaPredicted RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 LARP4BQ92615 738 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 SNX21Q969T3 373 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TMEM125Q96AQ2 219 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 NACC2Q96BF6 587 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 FAM120BQ96EK7 910 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TRMT61AQ96FX7 289 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CNDP2Q96KP4 475 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 JAKMIP1Q96N16 626 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CD180Q99467 661 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 ZNF768Q9H5H4 540 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 PDE11AQ9HCR9 933 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 TLR8Q9NR97 1041 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 HCFC1R1Q9NWW0 138 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 KCND2Q9NZV8 630 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 MTRRQ9UBK8 725 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 SARDHQ9UL12 918 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 REXO2Q9Y3B8 237 aaKnown RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 SOS1Q07889 1333 aaPredicted RBP5.89□□□□□ -1.47
LINC00348-201ENST00000428761 CLSPNQ9HAW4 1339 aa5.89□□□□□ -1.47
LINC00348-201ENST00000428761 NPHP4O75161 1426 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms