RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 KRT72Q14CN4 511 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 C16orf72Q14CZ0 275 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 NFIL3Q16649 462 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 HIF1AQ16665 826 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 TMEM259Q4ZIN3 620 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 KHDRBS2Q5VWX1 349 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CRLF3Q8IUI8 442 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ADSSL1Q8N142 457 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 UBE2Q2Q8WVN8 375 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 GOLGA2P5Q9HBQ8 144 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 EML4Q9HC35 981 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 IMP3Q9NV31 184 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 DNAJC11Q9NVH1 559 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 IGSF9Q9P2J2 1179 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 RPS6KB2Q9UBS0 482 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 TEKT2Q9UIF3 430 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 MBLAC1A4D2B0 266 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 PAEPP09466 180 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ITGB6P18564 788 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 COL9A1P20849 921 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CDH3P22223 829 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CORO1AP31146 461 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ZNF135P52742 658 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SH3RF1Q7Z6J0 888 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 FAM129CQ86XR2 697 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 MAP4K3Q8IVH8 894 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 KIRREL3Q8IZU9 778 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 C12orf76Q8N812 135 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ZNF248Q8NDW4 579 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 FAM136AQ96C01 138 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 MTBPQ96DY7 904 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 HAPLN3Q96S86 360 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ACO2Q99798 780 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 APOL2Q9BQE5 337 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 MLPHQ9BV36 600 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 FICDQ9BVA6 458 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 STX18Q9P2W9 335 aaKnown RBP7.38□□□□□ -1.23
CNOT4-206ENST00000428680 SCN10AQ9Y5Y9 1956 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 CENPFP49454 3210 aa7.38□□□□□ -1.23
CNOT4-206ENST00000428680 ATRXP46100 2492 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 BAZ2AQ9UIF9 1905 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 SLC25A14O95258 325 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 PTPN7P35236 360 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MMP13P45452 471 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 CYP4F8P98187 520 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GRM2Q14416 872 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 DNAJB7Q7Z6W7 309 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 FAM35AQ86V20 835 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 WFIKKN2Q8TEU8 576 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GDPD5Q8WTR4 605 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 WNT8BQ93098 351 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 LRRC46Q96FV0 321 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 CHCHD3Q9NX63 227 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 PSME2Q9UL46 239 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 SHOC2Q9UQ13 582 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GNG14A0A1W2PPG7 69 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 C19orf67A6NJJ6 358 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 F8W810 466 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 PCNAP12004 261 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 COX7A2P14406 83 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 CYP2F1P24903 491 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 STIP1P31948 543 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GALCP54803 685 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 SESN3P58005 492 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ETF1P62495 437 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 IZUMO3Q5VZ72 239 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 TPRG1Q6ZUI0 275 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 USP49Q70CQ1 688 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GLT6D1Q7Z4J2 308 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GAS2L3Q86XJ1 694 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 GALNT13Q8IUC8 556 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 C2orf15Q8WU43 125 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ZYG11BQ9C0D3 744 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 INTS9Q9NV88 658 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 DRG1Q9Y295 367 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 LINC01553A4QN01 128 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 QSOX1O00391 747 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ZBTB14O43829 449 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 TGM2P21980 687 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ALDH4A1P30038 563 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 FDFT1P37268 417 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 TAS2R50P59544 299 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 TRADDQ15628 312 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ZNF507Q8TCN5 953 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 PHF7Q9BWX1 381 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ACTR8Q9H981 624 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 PPIEQ9UNP9 301 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MGAT4DA6NG13 374 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MEIS2O14770 477 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MFAP3LO75121 409 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 CLDN11O75508 207 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 UGT2B4P06133 528 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MLNP12872 115 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MASP1P48740 699 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ALDH18A1P54886 795 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 OC90Q02509 493 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms