RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 FAM72AQ5TYM5 149 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 FAM72DQ6L9T8 149 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 FAM72BQ86X60 149 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 ZDHHC17Q8IUH5 632 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 SPNS2Q8IVW8 549 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 ANKRD52Q8NB46 1076 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 UNKQ9C0B0 810 aaKnown RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 NMRAL1Q9HBL8 299 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 EIF2B3Q9NR50 452 aaKnown RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 CHRAC1Q9NRG0 131 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 KLHL8Q9P2G9 620 aaPredicted RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 STK39Q9UEW8 545 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 APPL1Q9UKG1 709 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 PSMD13Q9UNM6 376 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 ZCWPW2A0A1B0GU75 182 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 TFAP2AP05549 437 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 ATP6V1B1P15313 513 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 DPP6P42658 865 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 MAGEA12P43365 314 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 NDUFV1P49821 464 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 SLC26A2P50443 739 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 BST2Q10589 180 aaKnown RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 TTLL12Q14166 644 aaPredicted RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 ARMC3Q5W041 872 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 SDCCAG8Q86SQ7 713 aaPredicted RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 TTC39CQ8N584 583 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
GHDC-203ENST00000428494 FAM156AQ8NDB6 213 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 EZH1Q92800 747 aaPredicted RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 RCN3Q96D15 328 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 DNAJC1Q96KC8 554 aaKnown RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 CNBD2Q96M20 576 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 NAT9Q9BTE0 207 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 UBP1Q9NZI7 540 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 VANGL2Q9ULK5 521 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 PEX1O43933 1283 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 TCN1P20061 433 aaPredicted RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 GLUD2P49448 558 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 CEACAM7Q14002 265 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 FLOT2Q14254 428 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 CNGA3Q16281 694 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 SPANXN3Q5MJ09 141 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 OTUD1Q5VV17 481 aaPredicted RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 IYDQ6PHW0 289 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 ARHGAP22Q7Z5H3 698 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 TRIM74Q86UV6 250 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 TRIM73Q86UV7 250 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 APOBEC3FQ8IUX4 373 aaKnown RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 GALNT4Q8N4A0 578 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 B4GALNT2Q8NHY0 566 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 AFG1LQ8WV93 481 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 MPP4Q96JB8 637 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 CATSPER2Q96P56 530 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 EIF2AQ9BY44 585 aaKnown RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 ZDHHC2Q9UIJ5 367 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 SLC39A10Q9ULF5 831 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 VILLO15195 856 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 SPTLC1O15269 473 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 CRTAMO95727 393 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 LGALS2P05162 132 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 ENO3P13929 434 aaPredicted RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 AVPR1AP37288 418 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 MATKP42679 507 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 ADIGQ0VDE8 80 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 MTA1Q13330 715 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 NAB1Q13506 487 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 ARL13AQ5H913 290 aaPredicted RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 NXNQ6DKJ4 435 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 RBM44Q6ZP01 1051 aaKnown RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 CLEC14AQ86T13 490 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 METTL25Q8N6Q8 603 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 KYQ8NBH2 561 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 BTBD9Q96Q07 612 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 ILKAPQ9H0C8 392 aaPredicted RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 LRRC40Q9H9A6 602 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 IARS2Q9NSE4 1012 aaKnown RBP16.05■□□□□ 0.16
GHDC-203ENST00000428494 LZTS1Q9Y250 596 aa16.05■□□□□ 0.16
GHDC-203ENST00000428494 RGSL1A5PLK6 1076 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 MATN2O00339 956 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 PHGDHO43175 533 aaKnown RBP16.04■□□□□ 0.16
GHDC-203ENST00000428494 PIGNO95427 931 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 THRAP10827 490 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 TKTP29401 623 aaKnown RBP16.04■□□□□ 0.16
GHDC-203ENST00000428494 PRDX6P30041 224 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
GHDC-203ENST00000428494 GRIA4P48058 902 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 NAGLUP54802 743 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 SNX16P57768 344 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 PDK1Q15118 436 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 ZNF423Q2M1K9 1284 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 KIZQ2M2Z5 673 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 SLC25A52Q3SY17 297 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 NOL9Q5SY16 702 aaKnown RBP16.04■□□□□ 0.16
GHDC-203ENST00000428494 C6orf52Q5T4I8 152 aa16.04■□□□□ 0.16
GHDC-203ENST00000428494 STRADAQ7RTN6 431 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms