RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MAPK15Q8TD08 544 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 DEPDC1BQ8WUY9 529 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 SCUBE2Q9NQ36 999 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 GPRC5CQ9NQ84 441 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 PAK5Q9P286 719 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 WRAP73Q9P2S5 460 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-206ENST00000428313 PCDHGA11Q9Y5H2 935 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 ST14Q9Y5Y6 855 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 H0YIN7 160 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 MATN1P21941 496 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 KDELR1P24390 212 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 EEF1DP29692 281 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 GNA15P30679 374 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 GABPAQ06546 454 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 CDC20Q12834 499 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 INAVAQ3KP66 663 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 ATAD3BQ5T9A4 648 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 DCUN1D2Q6PH85 259 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 AKAP14Q86UN6 197 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 CAND1Q86VP6 1230 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 DCP2Q8IU60 420 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 GALNT13Q8IUC8 556 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 PARP8Q8N3A8 854 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 SPERTQ8NA61 448 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 PI4K2AQ9BTU6 479 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 SBF2Q86WG5 1849 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 LOC105371267A0A1B0GV96 52 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 DYTNA2CJ06 578 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 ALDOAP04075 364 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 NCAM1P13591 858 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 ACO1P21399 889 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 CHRNEQ04844 493 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 MAPRE1Q15691 268 aaKnown RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 NEK10Q6ZWH5 1172 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 ERMP1Q7Z2K6 904 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 ANKRD13AQ8IZ07 590 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 SEPT8Q92599 483 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 TP63Q9H3D4 680 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-206ENST00000428313 ARMC1Q9NVT9 282 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
C9orf3-206ENST00000428313 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 FAM172BPA6NC97 362 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 H2AFYO75367 372 aaKnown RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 CKMT2P17540 419 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 RFC1P35251 1148 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 BMPR1AP36894 532 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 ACADSBP45954 432 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 LEPRP48357 1165 aaKnown RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 SIK1P57059 783 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 SLC25A11Q02978 314 aaKnown RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 CYP24A1Q07973 514 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 NEDD8Q15843 81 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 GRIK5Q16478 980 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 WDR45BQ5MNZ6 344 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 BTLAQ7Z6A9 289 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 ZBTB46Q86UZ6 589 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 TDRD5Q8NAT2 981 aaKnown RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 MCUQ8NE86 351 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 NRBF2Q96F24 287 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 VMP1Q96GC9 406 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 GPR101Q96P66 508 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 AMNQ9BXJ7 453 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 ZBTB26Q9HCK0 441 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 C20orf96Q9NUD7 363 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 RNF103O00237 685 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 TPP1O14773 563 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 NTRK1P04629 796 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 NR4A1P22736 598 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 TRIM71Q2Q1W2 868 aaKnown RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 BRDTQ58F21 947 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 TRMT10BQ6PF06 316 aaKnown RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 C15orf39Q6ZRI6 1047 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 GLT1D1Q96MS3 346 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-206ENST00000428313 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 CNGB3Q9NQW8 809 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 PCDHA11Q9Y5I1 949 aa16.38■□□□□ 0.21
C9orf3-206ENST00000428313 LRRIQ4A6NIV6 560 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 SCO2O43819 266 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 TCN1P20061 433 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-206ENST00000428313 CXCR2P25025 360 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 PSME3P61289 254 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 DARS2Q6PI48 645 aaKnown RBP16.37■□□□□ 0.21
C9orf3-206ENST00000428313 ZNF773Q6PK81 442 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 RFX6Q8HWS3 928 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 FAM156AQ8NDB6 213 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms