RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 AADATQ8N5Z0 425 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 AOPEPQ8N6M6 819 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 ANKRD20A12PQ8NF67 263 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 NEK11Q8NG66 645 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 SLC30A5Q8TAD4 765 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 C11orf70Q9BRQ4 267 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 FEM1AQ9BSK4 669 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 MUC3BQ9H195 1237 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 NEUROG2Q9H2A3 272 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 TM9SF3Q9HD45 589 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 PAXBP1Q9Y5B6 917 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 OR51B4Q9Y5P0 310 aa18.92■□□□□ 0.62
PSPC1-202ENST00000427943 SH3BP5O60239 455 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 IL1BP01584 269 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 IGHV4-34P06331 123 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 RHOCP08134 193 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 RDXP35241 583 aaKnown RBP18.91■□□□□ 0.62
PSPC1-202ENST00000427943 STAT1P42224 750 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 AFF3P51826 1226 aaKnown RBP18.91■□□□□ 0.62
PSPC1-202ENST00000427943 METAP1P53582 386 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 GALCP54803 685 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 SIM1P81133 766 aaPredicted RBP18.91■□□□□ 0.62
PSPC1-202ENST00000427943 ATP11AP98196 1134 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 ELAVL3Q14576 367 aaKnown RBP18.91■□□□□ 0.62
PSPC1-202ENST00000427943 NCAPHQ15003 741 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 ACCSLQ4AC99 568 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 RAB6CQ53S08 254 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 NCEH1Q6PIU2 408 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 TFAP2DQ7Z6R9 452 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 FAM131BQ86XD5 332 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 FRS2Q8WU20 508 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 RAB6CQ9H0N0 254 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 HSD3B7Q9H2F3 369 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 GAREM1Q9H706 876 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 MPP6Q9NZW5 540 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 TMEM63CQ9P1W3 806 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 FNDC3AQ9Y2H6 1198 aaKnown RBP18.91■□□□□ 0.62
PSPC1-202ENST00000427943 TBC1D30Q9Y2I9 924 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 KNL1Q8NG31 2342 aa18.91■□□□□ 0.62
PSPC1-202ENST00000427943 CHD5Q8TDI0 1954 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 E9PAM4 449 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 PLK4O00444 970 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 BNIP3LO60238 219 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 GJB6O95452 261 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 CER1O95813 267 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 ADH1BP00325 375 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
PSPC1-202ENST00000427943 MMP8P22894 467 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 CD27P26842 260 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 UBXN1Q04323 297 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 TYRO3Q06418 890 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 CDO1Q16878 200 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 LRSAM1Q6UWE0 723 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 Q6ZVU0 165 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 BNIPLQ7Z465 357 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 NAXDQ8IW45 347 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 JOSD2Q8TAC2 188 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 PPP1R9BQ96SB3 815 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 PSMB7Q99436 277 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 FZD4Q9ULV1 537 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 DAAM1Q9Y4D1 1078 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 FRYQ5TBA9 3013 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 CEP295Q9C0D2 2601 aa18.9■□□□□ 0.62
PSPC1-202ENST00000427943 EPG5Q9HCE0 2579 aa18.89■□□□□ 0.62
PSPC1-202ENST00000427943 ATP9BO43861 1147 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 SNAP91O60641 907 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 C5AR1P21730 350 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 DRD3P35462 400 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 SFSWAPQ12872 951 aaKnown RBP18.89■□□□□ 0.61
PSPC1-202ENST00000427943 SLC14A1Q13336 389 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 DLG2Q15700 870 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 C15orf59Q2T9L4 293 aaPredicted RBP18.89■□□□□ 0.61
PSPC1-202ENST00000427943 HLA-BQ31612 363 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 POM121L1PQ3SYA9 428 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 LRRC31Q6UY01 552 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 APTXQ7Z2E3 356 aaKnown RBP18.89■□□□□ 0.61
PSPC1-202ENST00000427943 SH2D3CQ8N5H7 860 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 OR8D1Q8WZ84 308 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 PCDHB18PQ96TA0 734 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 ORAI3Q9BRQ5 295 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 ADAMTS1Q9UHI8 967 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 SNX11Q9Y5W9 270 aa18.89■□□□□ 0.61
PSPC1-202ENST00000427943 LRRC72A6NJI9 287 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 SRGAP2O75044 1071 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 SRCP12931 536 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 ATP1A3P13637 1013 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 GOT1P17174 413 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 GRIA4P48058 902 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 ADPRHP54922 357 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 TEAD4Q15561 434 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 KIF19Q2TAC6 998 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 ARTNQ5T4W7 220 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 IL27RAQ6UWB1 636 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 TRIM72Q6ZMU5 477 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 ARCQ7LC44 396 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 ADAT2Q7Z6V5 191 aaKnown RBP18.88■□□□□ 0.61
PSPC1-202ENST00000427943 OR2T34Q8NGX1 318 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 OR14C36Q8NHC7 312 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 RXFP2Q8WXD0 754 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 SLC6A18Q96N87 628 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms