RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PSMB4P28070 264 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 RARRES1P49788 294 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 OTOP1Q7RTM1 612 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 PRSS58Q8IYP2 241 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
SPG11-202ENST00000427534 LGMNQ99538 433 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 LACRTQ9GZZ8 138 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 VPS33BQ9H267 617 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 AP5Z1O43299 807 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ELK3P41970 407 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 PRR23BQ6ZRT6 265 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 HGH1Q9BTY7 390 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 FRMD8Q9BZ67 464 aaPredicted RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 ZFP14Q9HCL3 533 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 SYBUQ9NX95 663 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 FAM198AQ9UFP1 575 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 GPN3Q9UHW5 284 aaPredicted RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 COQ6Q9Y2Z9 468 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 GZMAP12544 262 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 KIAA0895Q8NCT3 520 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ACTL9Q8TC94 416 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 KIAA1683Q9H0B3 1180 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ALG9Q9H6U8 611 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ASB8Q9H765 288 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 CCDC167Q9P0B6 97 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 CPA3P15088 417 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 SLC1A6P48664 564 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 POLD2P49005 469 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 USP45Q70EL2 814 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 ARHGAP20Q9P2F6 1191 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 SOX13Q9UN79 622 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 COG5Q9UP83 839 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 ANKDD1BA6NHY2 528 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 F8VP50 259 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 RAB27AP51159 221 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 DUSP4Q13115 394 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 AASDHQ4L235 1098 aaPredicted RBP13.38□□□□□ -0.27
SPG11-202ENST00000427534 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 BTRCQ9Y297 605 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 PREX1Q8TCU6 1659 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 LRRIQ1Q96JM4 1722 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 PIPSLA2A3N6 862 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 IQCF5A8MTL0 148 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
SPG11-202ENST00000427534 RBL1P28749 1068 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 SERPINB12Q96P63 405 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 NDEL1Q9GZM8 345 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 RIBC2Q9H4K1 309 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 UXTQ9UBK9 157 aaPredicted RBP13.38□□□□□ -0.27
SPG11-202ENST00000427534 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 C16orf96A6NNT2 1141 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 FAM151BQ6UXP7 276 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 KIRREL3Q8IZU9 778 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 OR52K1Q8NGK4 314 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 HTR3CQ8WXA8 447 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 MRPL9Q9BYD2 267 aaKnown RBP13.38□□□□□ -0.27
SPG11-202ENST00000427534 PABPC3Q9H361 631 aaKnown RBP13.38□□□□□ -0.27
SPG11-202ENST00000427534 CYLDQ9NQC7 956 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 ACOT9Q9Y305 439 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 TMEM191CA6NGB0 347 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 RAD51BO15315 384 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 FAM20BO75063 409 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 CHRNB3Q05901 458 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 PFKFB4Q16877 469 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 ATAD3BQ5T9A4 648 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 LRRC6Q86X45 466 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 SYT12Q8IV01 421 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 FAM20CQ8IXL6 584 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 TP53INP1Q96A56 240 aa13.38□□□□□ -0.27
SPG11-202ENST00000427534 IMP3Q9NV31 184 aaKnown RBP13.38□□□□□ -0.27
SPG11-202ENST00000427534 CCDC154A6NI56 674 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 ZBTB14O43829 449 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 LPIN1Q14693 890 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 WDR93Q6P2C0 686 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 MFSD7Q6UXD7 560 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 WDR36Q8NI36 951 aaKnown RBP13.37□□□□□ -0.27
SPG11-202ENST00000427534 SERPINB11Q96P15 392 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
SPG11-202ENST00000427534 RABGEF1Q9UJ41 708 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 KIAA1257Q9ULG3 409 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 DUSP12Q9UNI6 340 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 CXCL11O14625 94 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 CLUP10909 449 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 MAPK1P28482 360 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 CATSPERZQ9NTU4 200 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 DISP2A7MBM2 1401 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 RASGRP1O95267 797 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 GPR15P49685 360 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 GPR158Q5T848 1215 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 IZUMO1Q8IYV9 350 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 KLHL23Q8NBE8 558 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 METTL6Q8TCB7 284 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 C18orf25Q96B23 403 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms