RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 MEX3CQ5U5Q3 659 aaKnown RBP2.68□□□□□ -1.98
PTPRC-208ENST00000427110 AWAT2Q6E213 333 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 ANO7Q6IWH7 933 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 SLC30A9Q6PML9 568 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 LVRNQ6Q4G3 990 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 LRIG3Q6UXM1 1119 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 CYB5R4Q7L1T6 521 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 RNF144BQ7Z419 303 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 IRF2BP2Q7Z5L9 587 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 KLBQ86Z14 1044 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 RFX6Q8HWS3 928 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 SCN4BQ8IWT1 228 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 TCP11L2Q8N4U5 519 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 FAM47BQ8NA70 645 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 C9orf106Q8NAJ2 232 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 IGFBPL1Q8WX77 278 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 CUL5Q93034 780 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 HVCN1Q96D96 273 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 HERC2P3Q9BVR0 1158 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 SCNM1Q9BWG6 230 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 TM2D2Q9BX73 214 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 GPR63Q9BZJ6 419 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 STN1Q9H668 368 aaKnown RBP2.68□□□□□ -1.98
PTPRC-208ENST00000427110 WASH6PQ9NQA3 447 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 ALKBH4Q9NXW9 302 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 PDP2Q9P2J9 529 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 KLQ9UEF7 1012 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 SLC13A4Q9UKG4 626 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 FBXO4Q9UKT5 387 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 TNFSF13BQ9Y275 285 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 LMTK3Q96Q04 1460 aa2.68□□□□□ -1.98
PTPRC-208ENST00000427110 CCDC196A0A1B0GTZ2 297 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TCRBV7S3A2A0A539 114 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 SLC22A23A1A5C7 686 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 DPPA5A6NC42 116 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 MCIDASD6RGH6 385 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 EYA2O00167 538 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 HOXC11O43248 304 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 MSI1O43347 362 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 STRNO43815 780 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 HBP1O60381 514 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CBX6O95503 412 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 METTL18O95568 372 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 PRF1P14222 555 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 PKMP14618 531 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CD53P19397 219 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 RPS6KB1P23443 525 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CHRNA5P30532 468 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 HOXA7P31268 230 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CIITAP33076 1130 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 KRT9P35527 623 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 LIFRP42702 1097 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CCR5P51681 352 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ADPRHP54922 357 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ARHGAP8P85298 464 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TBL3Q12788 808 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TBX2Q13207 712 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 STIM1Q13586 685 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 BYSLQ13895 437 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 IL13RA2Q14627 380 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TRIP6Q15654 476 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 NFIL3Q16649 462 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 SLC9C1Q4G0N8 1177 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 PXDC1Q5TGL8 231 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 RETSATQ6NUM9 610 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 MTFR2Q6P444 385 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF474Q6S9Z5 364 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 BBS12Q6ZW61 710 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TMTC1Q8IUR5 882 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 BRSK2Q8IWQ3 736 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 OR52N4Q8NGI2 321 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF398Q8TD17 642 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 NOC3LQ8WTT2 800 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ZFPM2Q8WW38 1151 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 IP6K1Q92551 441 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 HTRA1Q92743 480 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ATP2A3Q93084 1043 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF347Q96SE7 839 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CD180Q99467 661 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 IFT27Q9BW83 186 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 SLC26A6Q9BXS9 759 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CADM1Q9BY67 442 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 CTDSP1Q9GZU7 261 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 MROH8Q9H579 483 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 ERVK-5Q9HDB9 667 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 MLXIPLQ9NP71 852 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 UBN1Q9NPG3 1134 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TLR8Q9NR97 1041 aaKnown RBP2.67□□□□□ -1.98
PTPRC-208ENST00000427110 TMEM160Q9NX00 188 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 GJD2Q9UKL4 321 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 HSF4Q9ULV5 492 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 DHDHQ9UQ10 334 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 PKP3Q9Y446 797 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 SPATA31A5Q5VU36 1347 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 SPATA31A7Q8IWB4 1347 aa2.67□□□□□ -1.98
PTPRC-208ENST00000427110 A0A1B0GVC2 190 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CXorf65A6NEN9 183 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 SH2D7A6NKC9 451 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 A6NLC8 198 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms