RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ELF4Q99607 663 aaPredicted RBP10.35□□□□□ -0.75
GACAT3-201ENST00000426539 CCDC86Q9H6F5 360 aaKnown RBP10.35□□□□□ -0.75
GACAT3-201ENST00000426539 FAM204AQ9H8W3 233 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 DDIT4Q9NX09 232 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 COX16Q9P0S2 106 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 APEX2Q9UBZ4 518 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 SARDHQ9UL12 918 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 CEP83Q9Y592 693 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 HS3ST4Q9Y661 456 aa10.35□□□□□ -0.75
GACAT3-201ENST00000426539 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 WDFY3Q8IZQ1 3526 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 A0A1B0GVM2 712 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 TCAF2A6NFQ2 919 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CBX4O00257 560 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 ATP9BO43861 1147 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 HSF2BPO75031 334 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 RTN2O75298 545 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 FGFR1OPO95684 399 aaKnown RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 ADH1BP00325 375 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 IL1BP01584 269 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 TFE3P19532 575 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 ABCB4P21439 1286 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CD38P28907 300 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CCR1P32246 355 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CLCN1P35523 988 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CLDN6P56747 220 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 NXPH1P58417 271 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SFSWAPQ12872 951 aaKnown RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SMAD1Q15797 465 aaKnown RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CAMK4Q16566 473 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 EXOC3L4Q17RC7 722 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 C5orf22Q49AR2 442 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 EFHC1Q5JVL4 640 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 LCE2DQ5TA82 110 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 TTC39BQ5VTQ0 682 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 RNF219Q5W0B1 726 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 DHRS13Q6UX07 377 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 GBP6Q6ZN66 633 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 C11orf57Q6ZUT1 292 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SLC47A2Q86VL8 602 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SPATS2Q86XZ4 545 aaKnown RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 ZNF683Q8IZ20 524 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SAP25Q8TEE9 199 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 RPRD1AQ96P16 312 aaPredicted RBP10.34□□□□□ -0.75
GACAT3-201ENST00000426539 FEM1AQ9BSK4 669 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 PLCB1Q9NQ66 1216 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 AASDHPPTQ9NRN7 309 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 ARHGAP20Q9P2F6 1191 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SLC12A6Q9UHW9 1150 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 VANGL2Q9ULK5 521 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 PPM1HQ9ULR3 514 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 RAXQ9Y2V3 346 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 SNX10Q9Y5X0 201 aa10.34□□□□□ -0.75
GACAT3-201ENST00000426539 DMXL2Q8TDJ6 3036 aa10.33□□□□□ -0.75
GACAT3-201ENST00000426539 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
GACAT3-201ENST00000426539 TRABD2BA6NFA1 517 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 RNF103O00237 685 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 FOXN3O00409 490 aaPredicted RBP10.33□□□□□ -0.76
GACAT3-201ENST00000426539 PLRG1O43660 514 aaKnown RBP10.33□□□□□ -0.76
GACAT3-201ENST00000426539 DFNA5O60443 496 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 PAGE1O75459 146 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 DAB1O75553 588 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 CNTN5O94779 1100 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 SLC2A3P11169 496 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 SLC6A3Q01959 620 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 SULT2A1Q06520 285 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 NME3Q13232 169 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 CCDC157Q569K6 752 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 RABGAP1LQ5R372 815 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 AGBL4Q5VU57 503 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 OR6B2Q6IFH4 312 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 SLC26A9Q7LBE3 791 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 KANSL1Q7Z3B3 1105 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 ZNF397Q8NF99 534 aaPredicted RBP10.33□□□□□ -0.76
GACAT3-201ENST00000426539 RNF34Q969K3 372 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 SERAC1Q96JX3 654 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 FAM81BQ96LP2 452 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 SPAG5Q96R06 1193 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 PSMB7Q99436 277 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 NPY6RQ99463 290 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 PIGVQ9NUD9 493 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 DKK4Q9UBT3 224 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 FTSJ1Q9UET6 329 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 DNAJC12Q9UKB3 198 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D30Q9Y2I9 924 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 PLXNA2O75051 1894 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 TMEM131Q92545 1883 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 PTPRBP23467 1997 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3DA0A087WVF3 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3IA0A087WXS9 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3EA0A087X179 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3KA0A087X1G2 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 FAM170AA1A519 330 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3FA6NER0 549 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms