RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TKTL1P51854 596 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 CNGA3Q16281 694 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 SLC9B1Q4ZJI4 515 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 FAM72AQ5TYM5 149 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 FAM72DQ6L9T8 149 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 FRMD7Q6ZUT3 714 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 FAM72BQ86X60 149 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 COG4Q9H9E3 785 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 CORO1CQ9ULV4 474 aaPredicted RBP13.67□□□□□ -0.22
USP42-203ENST00000426246 MEIS3P2A8K0S8 358 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 CHADO15335 359 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TSPAN1O60635 241 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 PIRTP0C851 137 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 MX2P20592 715 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 PRPSAP1Q14558 356 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 RBBP5Q15291 538 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 SDHAF4Q5VUM1 108 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 DRICH1Q6PGQ1 229 aaPredicted RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 MAB21L3Q8N8X9 362 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TDRD5Q8NAT2 981 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 ZNF483Q8TF39 744 aaPredicted RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 RNF139Q8WU17 664 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 KCTD4Q8WVF5 259 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 LENG8Q96PV6 779 aaPredicted RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 SNX15Q9NRS6 342 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 SSX2IPQ9Y2D8 614 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 ALDOAP04075 364 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 CALRP27797 417 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 CCNFP41002 786 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 ETV4P43268 484 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 RANBP1P43487 201 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 MAP7D1Q3KQU3 841 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 ARHGAP17Q68EM7 881 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TFAP2DQ7Z6R9 452 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 SKA1Q96BD8 255 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 PTCD3Q96EY7 689 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 MCRS1Q96EZ8 462 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 SIGLEC10Q96LC7 697 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 NPAS2Q99743 824 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TUBB6Q9BUF5 446 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TRIM8Q9BZR9 551 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 TNPO2O14787 897 aaKnown RBP13.66□□□□□ -0.22
USP42-203ENST00000426246 PIGNO95427 931 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 DLG1Q12959 904 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 FBXO47Q5MNV8 452 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 ULBP1Q9BZM6 244 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 VANGL2Q9ULK5 521 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
USP42-203ENST00000426246 MYADML2A6NDP7 307 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 MAXP61244 160 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 FLOT2Q14254 428 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 SLC41A1Q8IVJ1 513 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 DENND6AQ8IWF6 608 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 TRIB2Q92519 343 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
USP42-203ENST00000426246 KCNK4Q9NYG8 393 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 AURKCQ9UQB9 309 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 TCRBV5S1A1TA0A578 114 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 ZBTB24O43167 697 aaPredicted RBP13.65□□□□□ -0.22
USP42-203ENST00000426246 CYBAP13498 195 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 ERCC2P18074 760 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
USP42-203ENST00000426246 L1CAMP32004 1257 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 CSHL1Q14406 222 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 TMEM259Q4ZIN3 620 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 NAT14Q8WUY8 206 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 ABT1Q9ULW3 272 aaKnown RBP13.65□□□□□ -0.22
USP42-203ENST00000426246 NFKB1P19838 968 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 AFF1P51825 1210 aaKnown RBP13.65□□□□□ -0.22
USP42-203ENST00000426246 RALGDSQ12967 914 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 CDC16Q13042 620 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 MFSD10Q14728 455 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 PDK2Q15119 407 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 ZNF410Q86VK4 478 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 ZNF567Q8N184 647 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 RCN3Q96D15 328 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 ELMO2Q96JJ3 720 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 GRIP2Q9C0E4 1043 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 LHX5Q9H2C1 402 aa13.65□□□□□ -0.22
USP42-203ENST00000426246 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 NDC80O14777 642 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 LYNP07948 512 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 GSTT1P30711 240 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 SFT2D3Q587I9 215 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 DCBLD1Q8N8Z6 715 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 SLC45A3Q96JT2 553 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 ECSITQ9BQ95 431 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms