RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 HLA-BQ31612 363 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 IL27RAQ6UWB1 636 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 DHRS13Q6UX07 377 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 ZNF366Q8N895 744 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 ZNF397Q8NF99 534 aaPredicted RBP13.13□□□□□ -0.31
SGCE-203ENST00000425444 NEK11Q8NG66 645 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 FIBINQ8TAL6 211 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 BAP1Q92560 729 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 MYEOVQ96EZ4 313 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 SIPA1Q96FS4 1042 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 LIMA1Q9UHB6 759 aaKnown RBP13.13□□□□□ -0.31
SGCE-203ENST00000425444 STAP1Q9ULZ2 295 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 AK5Q9Y6K8 562 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 M0QYT0 321 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 ERVH48-1M5A8F1 160 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 TNFSF14O43557 240 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 MOCS3O95396 460 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 MMEP08473 750 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 DLDP09622 509 aaKnown RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 CDH5P33151 784 aaPredicted RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 SOX5P35711 763 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 STAT1P42224 750 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 SULT1E1P49888 294 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 CXADRP78310 365 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 SUZ12Q15022 739 aaKnown RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 TTC39BQ5VTQ0 682 aaPredicted RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 NAA35Q5VZE5 725 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
SGCE-203ENST00000425444 CIR1Q86X95 450 aaPredicted RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 ZNF677Q86XU0 584 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
SGCE-203ENST00000425444 RRN3Q9NYV6 651 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
SGCE-203ENST00000425444 BTBD3Q9Y2F9 522 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
SGCE-203ENST00000425444 EPHB6O15197 1021 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 WISP1O95388 367 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 ASLP04424 464 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 CD6P30203 668 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 CSKP41240 450 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 GABRB2P47870 512 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 COPAP53621 1224 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 NOMO3P69849 1222 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 SRSF1Q07955 248 aaKnown RBP eCLIP13.11□□□□□ -0.31
SGCE-203ENST00000425444 MTA1Q13330 715 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 PTPRNQ16849 979 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 RNF219Q5W0B1 726 aaPredicted RBP13.11□□□□□ -0.31
SGCE-203ENST00000425444 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 MMS22LQ6ZRQ5 1243 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
SGCE-203ENST00000425444 TMPRSS12Q86WS5 348 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 XYLT1Q86Y38 959 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 SLC20A1Q8WUM9 679 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 CPA5Q8WXQ8 436 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 SIK3Q9Y2K2 1263 aa13.11□□□□□ -0.31
SGCE-203ENST00000425444 TLN1Q9Y490 2541 aaKnown RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 B8ZZF3 427 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 BCAT2O15382 392 aaPredicted RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 JUPP14923 745 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 ZNF18P17022 549 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 SCNN1AP37088 669 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 GGCXP38435 758 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 JAM2P57087 298 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 CDR2Q01850 454 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 BNC1Q01954 994 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 DEUP1Q05D60 604 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 EIF4EBP2Q13542 120 aaPredicted RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 NCAPHQ15003 741 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 FSCBQ5H9T9 825 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 PITRM1Q5JRX3 1037 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 TOE1Q96GM8 510 aaKnown RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 WDCPQ9H6R7 721 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 PIGVQ9NUD9 493 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 USP36Q9P275 1121 aaKnown RBP13.1□□□□□ -0.31
SGCE-203ENST00000425444 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 VANGL2Q9ULK5 521 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 PAXBP1Q9Y5B6 917 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 HS3ST4Q9Y661 456 aa13.1□□□□□ -0.31
SGCE-203ENST00000425444 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms