RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 CACUL1Q86Y37 369 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 NETO1Q8TDF5 533 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 FRS2Q8WU20 508 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 FAM129BQ96TA1 746 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 ZYG11BQ9C0D3 744 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 ISCUQ9H1K1 167 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 TSPY26PQ9H489 355 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 NEU3Q9UQ49 428 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 A0A0D9SEW6 157 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 EDDM13A0A1B0GTR0 161 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 ATP9BO43861 1147 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 RTN2O75298 545 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 FTLP02792 175 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 RHOCP08134 193 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 DPP6P42658 865 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 LIMK1P53667 647 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 PUM1Q14671 1186 aaKnown RBP eCLIP18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 ZNF776Q68DI1 518 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 TFAP2DQ7Z6R9 452 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 C12orf50Q8NA57 414 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 CADM4Q8NFZ8 388 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 CNPY3Q9BT09 278 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 GPR174Q9BXC1 333 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 PARVAQ9NVD7 372 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 EVLQ9UI08 416 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 VPS28Q9UK41 221 aa18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 BZW2Q9Y6E2 419 aaKnown RBP18.38■□□□□ 0.53
IGHV3-47-201ENST00000425060 ILVBLA1L0T0 632 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 SLC30A4O14863 429 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 ATMINO43313 823 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 NDUFS2O75306 463 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 LRIG2O94898 1065 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 PLEKP08567 350 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 VAV1P15498 845 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 SDHBP21912 280 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 HOXD12P35452 270 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 NNMTP40261 264 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 AASDHQ4L235 1098 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 C6orf118Q5T5N4 469 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 DCUN1D2Q6PH85 259 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 ZNF783Q6ZMS7 281 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 SLFN11Q7Z7L1 901 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 NLRP14Q86W24 1093 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 CPLX3Q8WVH0 158 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 HSPA12BQ96MM6 686 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 MUC3BQ9H195 1237 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 RETREG1Q9H6L5 497 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 SCML1Q9UN30 329 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 HS3ST2Q9Y278 367 aa18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 LUC7L2Q9Y383 392 aaKnown RBP18.37■□□□□ 0.53
IGHV3-47-201ENST00000425060 LNP1A1A4G5 178 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 ANKRD62A6NC57 917 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 TMEM191CA6NGB0 347 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 KHNYNO15037 678 aaKnown RBP18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 SNAP91O60641 907 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 MT-CO1P00395 513 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 DNTTP04053 509 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 SERPING1P05155 500 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 OR1E1P30953 314 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 ACSL1P33121 698 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 IRX4P78413 519 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 NUMA1Q14980 2115 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 SLC23A3Q6PIS1 610 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 STK40Q8N2I9 435 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 SH2D3CQ8N5H7 860 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 ARFGAP1Q8N6T3 406 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 DCAF4L2Q8NA75 395 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 DNASE2BQ8WZ79 361 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 FOXJ1Q92949 421 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 RTKNQ9BST9 563 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 PABPC3Q9H361 631 aaKnown RBP18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 NDFIP2Q9NV92 336 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 ADAMTS1Q9UHI8 967 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 VPS51Q9UID3 782 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 SLC25A13Q9UJS0 675 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 CDV3Q9UKY7 258 aaKnown RBP18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 FZD10Q9ULW2 581 aa18.36■□□□□ 0.53
IGHV3-47-201ENST00000425060 DNAH14Q0VDD8 3507 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 ATXN2Q99700 1313 aaKnown RBP18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 METTL12A8MUP2 240 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 TM4SF5O14894 197 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 ZMPSTE24O75844 475 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 SRCP12931 536 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 RHOQP17081 205 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 HNRNPH3P31942 346 aaKnown RBP18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 CASP14P31944 242 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 L1CAMP32004 1257 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 KRT83P78385 493 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 ZNF252P-AS1Q0IIN9 211 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 DLG2Q15700 870 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 CST6Q15828 149 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 TRIM61Q5EBN2 209 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 USP30Q70CQ3 517 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 FAM124AQ86V42 546 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 PYROXD2Q8N2H3 581 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 OR7D4Q8NG98 312 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 FNIP1Q8TF40 1166 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 C2orf49Q9BVC5 232 aaPredicted RBP18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 TRIM7Q9C029 511 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms